RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TVP23CQ96ET8 276 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 S100A13Q99584 98 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 PHB2Q99623 299 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 HOPXQ9BPY8 73 aaPredicted RBP2.06□□□□□ -2.08
SNHG1-222ENST00000545308 CMSS1Q9BQ75 279 aaKnown RBP2.06□□□□□ -2.08
SNHG1-222ENST00000545308 HSPB9Q9BQS6 159 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 MIEN1Q9BRT3 115 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 NKX6-2Q9C056 277 aaPredicted RBP2.06□□□□□ -2.08
SNHG1-222ENST00000545308 MRPL27Q9P0M9 148 aaKnown RBP2.06□□□□□ -2.08
SNHG1-222ENST00000545308 DNAH6Q9C0G6 4158 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 OR4C46A6NHA9 309 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 FAM223BA6NKX1 122 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 H0YJX3 145 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 M0R2N4 97 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 SLC17A3O00476 420 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 CYB5BO43169 146 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 DHFRP00374 187 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 IGLV3-1P01715 115 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 MIFP14174 115 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 ALOX5APP20292 161 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 CBLN1P23435 193 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 BLVRBP30043 206 aaPredicted RBP2.05□□□□□ -2.08
SNHG1-222ENST00000545308 SERPINB10P48595 397 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 FXYD6P3P58550 94 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 KRTAP10-10P60014 251 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 IFITM2Q01629 132 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 LTC4SQ16873 150 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 DEFB135Q30KP9 77 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 BCL2L15Q5TBC7 163 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 FAM223AQ8IWN6 122 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 C1orf158Q8N1D5 194 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 DAND5Q8N907 189 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 OR5C1Q8NGR4 320 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 OR11H2Q8NH07 326 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 GNPNAT1Q96EK6 184 aaPredicted RBP2.05□□□□□ -2.08
SNHG1-222ENST00000545308 MRPS24Q96EL2 167 aaKnown RBP2.05□□□□□ -2.08
SNHG1-222ENST00000545308 BTF3L4Q96K17 158 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 SMDT1Q9H4I9 107 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 CMC2Q9NRP2 79 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 OR52A1Q9UKL2 312 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 PKD1P98161 4303 aa2.05□□□□□ -2.08
SNHG1-222ENST00000545308 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 IGLV10-54A0A075B6I4 117 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 DEFB131BA0A096LNP1 70 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 TMEM30CPA0ZSE6 113 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 C2orf70A6NJV1 201 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 OR4C45A6NMZ5 311 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 MCRIP1C9JLW8 97 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 INMT-MINDY4F8WBC2 141 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 SULT1B1O43704 296 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 CREBL2O60519 120 aaPredicted RBP2.04□□□□□ -2.08
SNHG1-222ENST00000545308 YPEL1O60688 119 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 CDS2O95674 445 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 FAM107AO95990 144 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 IGHV3-7P01780 117 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 GYPBP06028 91 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 CRHBPP24387 322 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 PSME3P61289 254 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 DIAPH2-AS1Q14236 149 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 FXYD3Q14802 87 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 MORN2Q502X0 79 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 LINC01590Q5TEZ4 76 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 SPATA12Q7Z6I5 190 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 PXT1Q8NFP0 134 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 OR5D14Q8NGL3 314 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 LHFPL5Q8TAF8 219 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 TEX47Q8TBZ9 253 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 DGCR14Q96DF8 476 aaKnown RBP2.04□□□□□ -2.08
SNHG1-222ENST00000545308 YPEL2Q96QA6 119 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 COMMD5Q9GZQ3 224 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 EFCAB1Q9HAE3 211 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 COA4Q9NYJ1 87 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 TRAPPC2LQ9UL33 140 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 UFC1Q9Y3C8 167 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 R4GMQ9 66 aa2.04□□□□□ -2.08
SNHG1-222ENST00000545308 HERC1Q15751 4861 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 TRBV7-1A0A0A6YYK4 115 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 IGHV3-73A0A0B4J1V6 119 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 TMEM189A5PLL7 270 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 ZNF670-ZNF695F2Z2N8 137 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 COX7A2LO14548 114 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 SULT1C4O75897 302 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 APOA2P02652 100 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 TTRP02766 147 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 OR5G3P0C626 314 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 HIST1H1BP16401 226 aaKnown RBP2.03□□□□□ -2.08
SNHG1-222ENST00000545308 RPL27AP46776 148 aaKnown RBP2.03□□□□□ -2.08
SNHG1-222ENST00000545308 TAS2R20P59543 309 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 MPV17LQ2QL34 196 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 ZNF322Q6U7Q0 402 aaPredicted RBP2.03□□□□□ -2.08
SNHG1-222ENST00000545308 C15orf53Q8NAA6 179 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 OR1L8Q8NGR8 309 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 NEK7Q8TDX7 302 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 DYDC1Q8WWB3 177 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 LEAP2Q969E1 77 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 SFRP2Q96HF1 295 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 GPER1Q99527 375 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 TXNL4BQ9NX01 149 aaKnown RBP2.03□□□□□ -2.08
SNHG1-222ENST00000545308 DOK5Q9P104 306 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 ABRACLQ9P1F3 81 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms