RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 BOLA1Q9Y3E2 137 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 PAGE4O60829 102 aa8.16□□□□□ -1.1
HDAC4-216ENST00000544989 LTAP01374 205 aa8.16□□□□□ -1.1
HDAC4-216ENST00000544989 SFTA3P0C7M3 94 aa8.16□□□□□ -1.1
HDAC4-216ENST00000544989 ASIPP42127 132 aa8.16□□□□□ -1.1
HDAC4-216ENST00000544989 C9orf85Q96MD7 179 aa8.16□□□□□ -1.1
HDAC4-216ENST00000544989 MANBALQ9NQG1 85 aa8.16□□□□□ -1.1
HDAC4-216ENST00000544989 C11orf21Q9P2W6 132 aa8.16□□□□□ -1.1
HDAC4-216ENST00000544989 TRAV1-1A0A0B4J248 108 aa8.15□□□□□ -1.1
HDAC4-216ENST00000544989 K7EP13 123 aa8.15□□□□□ -1.1
HDAC4-216ENST00000544989 K7EQD1 137 aa8.15□□□□□ -1.1
HDAC4-216ENST00000544989 SIVA1O15304 175 aa8.15□□□□□ -1.1
HDAC4-216ENST00000544989 C1QBP02746 253 aa8.15□□□□□ -1.1
HDAC4-216ENST00000544989 Q6ZNX1 250 aa8.15□□□□□ -1.1
HDAC4-216ENST00000544989 PRADC1Q9BSG0 188 aa8.15□□□□□ -1.1
HDAC4-216ENST00000544989 TRAV9-2A0A087WT02 112 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 A8MWV9 139 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 B4DEV8 164 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 RS1O15537 224 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 RNASE3P12724 160 aaKnown RBP8.14□□□□□ -1.11
HDAC4-216ENST00000544989 GYPEP15421 78 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
HDAC4-216ENST00000544989 DNLZQ5SXM8 178 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 SLC51BQ86UW2 128 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 SYT8Q8NBV8 401 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 IL36BQ9NZH7 164 aa8.14□□□□□ -1.11
HDAC4-216ENST00000544989 IGKV3D-20A0A0C4DH25 116 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 A0A1B0GVY2 172 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 TRBV6-4A0A1B0GX49 114 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 NXPH4O95158 308 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 MGST1P10620 155 aaKnown RBP8.13□□□□□ -1.11
HDAC4-216ENST00000544989 TIRAPP58753 221 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 RHOHQ15669 191 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 ZNF674Q2M3X9 581 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 ZNF506Q5JVG8 444 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 CFAP126Q5VTH2 177 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 LYPD5Q6UWN5 251 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 ZFP2Q6ZN57 461 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 AKAP14Q86UN6 197 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
HDAC4-216ENST00000544989 KRBOX1C9JBD0 128 aa8.12□□□□□ -1.11
HDAC4-216ENST00000544989 SH2D1AO60880 128 aa8.12□□□□□ -1.11
HDAC4-216ENST00000544989 IFNA1P01562 189 aa8.12□□□□□ -1.11
HDAC4-216ENST00000544989 SULT1A2P50226 295 aa8.12□□□□□ -1.11
HDAC4-216ENST00000544989 HSPG2P98160 4391 aa8.11□□□□□ -1.11
HDAC4-216ENST00000544989 A0A1B0GV50 99 aa8.11□□□□□ -1.11
HDAC4-216ENST00000544989 PGPEP1LA6NFU8 196 aa8.11□□□□□ -1.11
HDAC4-216ENST00000544989 RHODO00212 210 aa8.11□□□□□ -1.11
HDAC4-216ENST00000544989 TAGLN2P37802 199 aaKnown RBP8.11□□□□□ -1.11
HDAC4-216ENST00000544989 BAGE2Q86Y30 109 aa8.11□□□□□ -1.11
HDAC4-216ENST00000544989 NHLRC2Q8NBF2 726 aa8.11□□□□□ -1.11
HDAC4-216ENST00000544989 SCO2A0A1W2PP80 73 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 CXCL1P09341 107 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 MED14OSP0DP75 135 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 EVI2AP22794 236 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 CRIP1P50238 77 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 NFE4Q86UQ8 179 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 SLC25A29Q8N8R3 303 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 GNG13Q9P2W3 67 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 PHLDA3Q9Y5J5 127 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 LY96Q9Y6Y9 160 aa8.1□□□□□ -1.11
HDAC4-216ENST00000544989 H3BVH4 76 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 M0R036 132 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 PDE6DO43924 150 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 ARMS2P0C7Q2 107 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 ZFP82Q8N141 532 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 C11orf52Q96A22 123 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 SMIM12Q96EX1 92 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 MLST8Q9BVC4 326 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 PARLQ9H300 379 aa8.09□□□□□ -1.11
HDAC4-216ENST00000544989 TRAV8-6A0A0B4J262 113 aa8.08□□□□□ -1.12
HDAC4-216ENST00000544989 RPL35P42766 123 aaKnown RBP8.08□□□□□ -1.12
HDAC4-216ENST00000544989 KRTAP1-5Q9BYS1 174 aa8.08□□□□□ -1.12
HDAC4-216ENST00000544989 SCRT2Q9NQ03 307 aa8.08□□□□□ -1.12
HDAC4-216ENST00000544989 BIN3Q9NQY0 253 aa8.08□□□□□ -1.12
HDAC4-216ENST00000544989 IGHV3-73A0A0B4J1V6 119 aa8.07□□□□□ -1.12
HDAC4-216ENST00000544989 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
HDAC4-216ENST00000544989 MEF2BQ02080 365 aaPredicted RBP8.07□□□□□ -1.12
HDAC4-216ENST00000544989 LOC100131303A0A0U1RQF7 123 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 GRIFINA4D1Z8 144 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 BCL2P10415 239 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 LINC00315P59091 139 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 CCL20P78556 96 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 TNP2Q05952 138 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 UFSP1Q6NVU6 142 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 C9orf62Q8N4C0 152 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 ATP6V0E2Q8NHE4 81 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 DAZAP1Q96EP5 407 aaKnown RBP8.06□□□□□ -1.12
HDAC4-216ENST00000544989 SFRP2Q96HF1 295 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 GTSF1LQ9H1H1 148 aa8.06□□□□□ -1.12
HDAC4-216ENST00000544989 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 A0A087WWC5 75 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 TMSB15BA0A087X1C1 80 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 XKRY2A2RUG3 117 aa8.05□□□□□ -1.12
HDAC4-216ENST00000544989 M0R381 172 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms