RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 Q8N2B8 174 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 FGFBP3Q8TAT2 258 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 WFDC5Q8TCV5 224 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 IMMP1LQ96LU5 166 aa3.91□□□□□ -1.78
SNHG1-218ENST00000541615 RPP25Q9BUL9 199 aaKnown RBP3.91□□□□□ -1.78
SNHG1-218ENST00000541615 GOLGA4Q13439 2230 aaKnown RBP3.91□□□□□ -1.78
SNHG1-218ENST00000541615 COL4A5P29400 1685 aa3.9□□□□□ -1.78
SNHG1-218ENST00000541615 CACNA1CQ13936 2221 aa3.9□□□□□ -1.78
SNHG1-218ENST00000541615 AGRNO00468 2067 aa3.9□□□□□ -1.78
SNHG1-218ENST00000541615 IGHV1-45A0A0A0MS14 117 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 H7C2G1 150 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 EFNA2O43921 213 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 PRSS2P07478 247 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 FREM3P0C091 2139 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 CXCL6P80162 114 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 HOXA4Q00056 320 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-218ENST00000541615 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 RNASE6Q93091 150 aaKnown RBP3.9□□□□□ -1.79
SNHG1-218ENST00000541615 RNF185Q96GF1 192 aa3.9□□□□□ -1.79
SNHG1-218ENST00000541615 HEATR1Q9H583 2144 aaKnown RBP3.9□□□□□ -1.79
SNHG1-218ENST00000541615 IGHV3OR16-10A0A075B7F0 116 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 K7EMT4 169 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 M0R378 163 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 M0R381 172 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 SOCS3O14543 225 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 CD70P32970 193 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 Q0VFX4 171 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 DAZAP2Q15038 168 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-218ENST00000541615 ATP11AUNQ6ZP68 121 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 C16orf47Q6ZP98 133 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-218ENST00000541615 LCA10Q71F78 164 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 ESM1Q9NQ30 184 aa3.89□□□□□ -1.79
SNHG1-218ENST00000541615 PHPT1Q9NRX4 125 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-218ENST00000541615 H0YGG7 62 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 I3L3M4 83 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 FSTL3O95633 263 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 IGLV2-11P01706 119 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 STATHP02808 62 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 PLA2G5P39877 138 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 FXYD7P58549 80 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 CIRBPQ14011 172 aaKnown RBP3.88□□□□□ -1.79
SNHG1-218ENST00000541615 SS18Q15532 418 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 TMEM30BQ3MIR4 351 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 SPINK9Q5DT21 86 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 FAM53AQ6NSI3 398 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-218ENST00000541615 C6orf223Q8N319 242 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 ZNF491Q8N8L2 437 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 C11orf45Q8TAV5 145 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 TIMM17AQ99595 171 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 SMIM2Q9BVW6 85 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 PROK2Q9HC23 129 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 RNF186Q9NXI6 227 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 TCF20Q9UGU0 1960 aaKnown RBP3.88□□□□□ -1.79
SNHG1-218ENST00000541615 MPDZO75970 2070 aa3.88□□□□□ -1.79
SNHG1-218ENST00000541615 IGHV4-4A0A075B6R2 117 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 C8orf87E5RJ46 101 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 F8WEM9 126 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 JMJD7-PLA2G4BH0Y9G9 81 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 J3QT63 122 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 IGHV4-34P06331 123 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 CD28P10747 220 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 SPTBP11277 2137 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 MIFP14174 115 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 UBE2AP49459 152 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 BRWD1-AS2P59051 145 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 RPL11P62913 178 aaKnown RBP3.87□□□□□ -1.79
SNHG1-218ENST00000541615 MORN5Q5VZ52 161 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 TMEM61Q8N0U2 210 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 OBSCN-AS1Q96MR7 158 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 UBL5Q9BZL1 73 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 ZNF576Q9H609 170 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 SPRR3Q9UBC9 169 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 LINC00588Q9Y4M8 146 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 LRP4O75096 1905 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 ADAMTS9Q9P2N4 1935 aa3.87□□□□□ -1.79
SNHG1-218ENST00000541615 IGHV1OR15-9A0A0B4J2B8 117 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 IGKV3D-7A0A0C4DH55 119 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 IGIPA6NJ69 53 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 E7EQL1 145 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 H0YGX0 51 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 TMEM256-PLSCR3K7ERE1 68 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 VCYO14598 125 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 ZNF73O43830 326 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-218ENST00000541615 RNASE1P07998 156 aaKnown RBP3.86□□□□□ -1.79
SNHG1-218ENST00000541615 MIAQ16674 131 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 C2orf66Q6UXQ4 117 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 PATE2Q6UY27 113 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 NRACQ8N912 160 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 KLHL30-AS1Q8NEE0 82 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 AMELXQ99217 191 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 OPRPNQ99935 248 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-218ENST00000541615 LINC00474Q9P2X8 69 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 PHLDA3Q9Y5J5 127 aa3.86□□□□□ -1.79
SNHG1-218ENST00000541615 COL5A1P20908 1838 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-218ENST00000541615 TANC2Q9HCD6 1990 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 IGKV1OR2-108A0A075B7D4 117 aa3.85□□□□□ -1.79
SNHG1-218ENST00000541615 F6UB75 175 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms