RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 TANC2Q9HCD6 1990 aa-0.87□□□□□ -2.55
ATM-217ENST00000531957 BLMP54132 1417 aaPredicted RBP-0.87□□□□□ -2.55
ATM-217ENST00000531957 IFNA1P01562 189 aa-0.87□□□□□ -2.55
ATM-217ENST00000531957 APOC1P02654 83 aa-0.87□□□□□ -2.55
ATM-217ENST00000531957 SDC2P34741 201 aa-0.87□□□□□ -2.55
ATM-217ENST00000531957 DYDC1Q8WWB3 177 aa-0.87□□□□□ -2.55
ATM-217ENST00000531957 CARD19Q96LW7 228 aa-0.87□□□□□ -2.55
ATM-217ENST00000531957 LRTM1Q9HBL6 345 aa-0.87□□□□□ -2.55
ATM-217ENST00000531957 BET1LQ9NYM9 111 aa-0.87□□□□□ -2.55
ATM-217ENST00000531957 MAP2P11137 1827 aaKnown RBP-0.87□□□□□ -2.55
ATM-217ENST00000531957 RREB1Q92766 1687 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 MYO18BQ8IUG5 2567 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 CHD8Q9HCK8 2581 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.88□□□□□ -2.55
ATM-217ENST00000531957 M0R3E3 92 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 S100A6P06703 90 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 DHRS4L2Q6PKH6 230 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 Q8IZM0 81 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 SPRR2FQ96RM1 72 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 NUBP2Q9Y5Y2 271 aa-0.88□□□□□ -2.55
ATM-217ENST00000531957 TRAPPC8Q9Y2L5 1435 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 DLC1Q96QB1 1528 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 PI4KAP42356 2102 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 FASNP49327 2511 aaKnown RBP-0.89□□□□□ -2.55
ATM-217ENST00000531957 NIPBLQ6KC79 2804 aaeCLIP-0.89□□□□□ -2.55
ATM-217ENST00000531957 LAMA3Q16787 3333 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 TRAV12-2A0A075B6T6 113 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 ZNF670-ZNF695F2Z2N8 137 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 MFSD11O43934 449 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 PYYP10082 97 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 SLC25A4P12235 298 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 HSD11B1P28845 292 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 OR5A2Q8NGI9 324 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 VPS13BQ7Z7G8 4022 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 C2CD3Q4AC94 2353 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 PCNX1Q96RV3 2341 aa-0.89□□□□□ -2.55
ATM-217ENST00000531957 USP54Q70EL1 1684 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 BCL9LQ86UU0 1499 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 TEX49A0A1B0GTD5 131 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 TRDV1A0A1B0GX56 115 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 GABARAPH6UMI1 98 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 K7EQZ3 153 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 APODP05090 189 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 POLR2JP52435 117 aaKnown RBP-0.9□□□□□ -2.55
ATM-217ENST00000531957 BLCAPP62952 87 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 LINC00305Q7Z4B0 112 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 FAM24BQ8N5W8 94 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 TEX29Q8N6K0 151 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 LYSTQ99698 3801 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 CNFNQ9BYD5 112 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 WDR87Q6ZQQ6 2873 aa-0.9□□□□□ -2.55
ATM-217ENST00000531957 ANKRD11Q6UB99 2663 aaPredicted RBP-0.91□□□□□ -2.55
ATM-217ENST00000531957 TRBV10-1A0A0K0K1A3 114 aa-0.91□□□□□ -2.56
ATM-217ENST00000531957 TRBV27A0A0K0K1C4 114 aa-0.91□□□□□ -2.56
ATM-217ENST00000531957 M0R2T5 61 aa-0.91□□□□□ -2.56
ATM-217ENST00000531957 LSM3P62310 102 aaKnown RBP-0.91□□□□□ -2.56
ATM-217ENST00000531957 BASP1P80723 227 aaKnown RBP-0.91□□□□□ -2.56
ATM-217ENST00000531957 FADDQ13158 208 aa-0.91□□□□□ -2.56
ATM-217ENST00000531957 TNS1Q9HBL0 1735 aaKnown RBP-0.92□□□□□ -2.56
ATM-217ENST00000531957 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.92□□□□□ -2.56
ATM-217ENST00000531957 KALRNO60229 2985 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.92□□□□□ -2.56
ATM-217ENST00000531957 DLEC1Q9Y238 1755 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 GVQW2A0A096LPI5 108 aaPredicted RBP-0.92□□□□□ -2.56
ATM-217ENST00000531957 TRAV13-1A0A0B4J241 112 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 IGHV1-24A0A0C4DH33 117 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 IFNA21P01568 189 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 MT1AP04731 61 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 CKS2P33552 79 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 ELOF1P60002 83 aaKnown RBP-0.92□□□□□ -2.56
ATM-217ENST00000531957 RPL19P84098 196 aaKnown RBP-0.92□□□□□ -2.56
ATM-217ENST00000531957 EMX2Q04743 252 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 SMIM11BQ8TCY0 68 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 SPTA1P02549 2419 aa-0.92□□□□□ -2.56
ATM-217ENST00000531957 TEP1Q99973 2627 aaKnown RBP-0.92□□□□□ -2.56
ATM-217ENST00000531957 SPTBN1Q01082 2364 aaKnown RBP-0.92□□□□□ -2.56
ATM-217ENST00000531957 H3BMG7 143 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 TCTAP57738 103 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 GNG3P63215 75 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 STX19Q8N4C7 294 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 SMIM20Q8N5G0 67 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 OR51A4Q8NGJ6 313 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 PRO0255Q9UI72 69 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 LAMTOR2Q9Y2Q5 125 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 SSC5DA1L4H1 1573 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 COL12A1Q99715 3063 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 IQSEC2Q5JU85 1478 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 CAMSAP1Q5T5Y3 1602 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 MYH2Q9UKX2 1941 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 DNAH7Q8WXX0 4024 aa-0.93□□□□□ -2.56
ATM-217ENST00000531957 CMYA5Q8N3K9 4069 aa-0.94□□□□□ -2.56
ATM-217ENST00000531957 DNAH1Q9P2D7 4330 aa-0.94□□□□□ -2.56
ATM-217ENST00000531957 TECPR2O15040 1411 aa-0.94□□□□□ -2.56
ATM-217ENST00000531957 TRAV17A0A0B4J275 112 aa-0.94□□□□□ -2.56
ATM-217ENST00000531957 A0A0D9SFI3 127 aa-0.94□□□□□ -2.56
ATM-217ENST00000531957 LOC730098B7Z3J9 87 aa-0.94□□□□□ -2.56
ATM-217ENST00000531957 S100A11P31949 105 aa-0.94□□□□□ -2.56
ATM-217ENST00000531957 SRP9P49458 86 aaKnown RBP-0.94□□□□□ -2.56
ATM-217ENST00000531957 MORN4Q8NDC4 146 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms