RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 FLI1Q01543 452 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-219ENST00000530404 SMUG1Q53HV7 270 aa13.78□□□□□ -0.2
TSPAN4-219ENST00000530404 RAB24Q969Q5 203 aa13.78□□□□□ -0.2
TSPAN4-219ENST00000530404 GAGE12JA6NER3 117 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 GGTLC3B5MD39 225 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 K7EQM0 130 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 LECT2O14960 151 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 CIDEAO60543 219 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 SUMO1P63165 101 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 GAGE1Q13065 139 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 GAGE4Q13068 117 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 GAGE5Q13069 117 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 GAGE13Q4V321 117 aa13.77□□□□□ -0.21
TSPAN4-219ENST00000530404 MGST1P10620 155 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-219ENST00000530404 ZFP69Q49AA0 526 aa13.76□□□□□ -0.21
TSPAN4-219ENST00000530404 SUN5Q8TC36 379 aa13.76□□□□□ -0.21
TSPAN4-219ENST00000530404 PARLQ9H300 379 aa13.76□□□□□ -0.21
TSPAN4-219ENST00000530404 Q9UF83 564 aa13.76□□□□□ -0.21
TSPAN4-219ENST00000530404 ATP6V0CP27449 155 aa13.75□□□□□ -0.21
TSPAN4-219ENST00000530404 DEFA1P59665 94 aa13.75□□□□□ -0.21
TSPAN4-219ENST00000530404 DEFA3P59666 94 aa13.75□□□□□ -0.21
TSPAN4-219ENST00000530404 OR2G3Q8NGZ4 309 aa13.75□□□□□ -0.21
TSPAN4-219ENST00000530404 LINC00479Q96M42 142 aa13.75□□□□□ -0.21
TSPAN4-219ENST00000530404 SH3BGRL3Q9H299 93 aa13.75□□□□□ -0.21
TSPAN4-219ENST00000530404 JPT2Q9H910 190 aa13.75□□□□□ -0.21
TSPAN4-219ENST00000530404 EPDR1Q9UM22 224 aa13.75□□□□□ -0.21
TSPAN4-219ENST00000530404 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 TRAV34A0A0B4J273 112 aa13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 LAGE3Q14657 143 aa13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 DAZ4Q86SG3 579 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 CYB561D1Q8N8Q1 229 aa13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 OR2T35Q8NGX2 323 aa13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 PTH2Q96A98 100 aa13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 DAZ3Q9NR90 486 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 BOLA1Q9Y3E2 137 aa13.74□□□□□ -0.21
TSPAN4-219ENST00000530404 IGKV3D-20A0A0C4DH25 116 aa13.73□□□□□ -0.21
TSPAN4-219ENST00000530404 LINC00694P0DN24 101 aa13.73□□□□□ -0.21
TSPAN4-219ENST00000530404 LGALSLQ3ZCW2 172 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-219ENST00000530404 TM2D2Q9BX73 214 aa13.73□□□□□ -0.21
TSPAN4-219ENST00000530404 SAMD10Q9BYL1 202 aa13.73□□□□□ -0.21
TSPAN4-219ENST00000530404 ALG5Q9Y673 324 aa13.73□□□□□ -0.21
TSPAN4-219ENST00000530404 S100A4P26447 101 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-219ENST00000530404 C14orf178Q8N769 122 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-219ENST00000530404 PSMG3Q9BT73 122 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-219ENST00000530404 CXorf1O96002 111 aa13.71□□□□□ -0.21
TSPAN4-219ENST00000530404 LINC01620Q4KN68 170 aa13.71□□□□□ -0.21
TSPAN4-219ENST00000530404 TMEM167BQ9NRX6 74 aa13.71□□□□□ -0.21
TSPAN4-219ENST00000530404 LRP1Q07954 4544 aaKnown RBP13.71□□□□□ -0.22
TSPAN4-219ENST00000530404 A6NHS1 94 aa13.7□□□□□ -0.22
TSPAN4-219ENST00000530404 A8MWV9 139 aa13.7□□□□□ -0.22
TSPAN4-219ENST00000530404 J3QL48 77 aa13.7□□□□□ -0.22
TSPAN4-219ENST00000530404 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
TSPAN4-219ENST00000530404 DNAJC30Q96LL9 226 aa13.7□□□□□ -0.22
TSPAN4-219ENST00000530404 ACTR3CQ9C0K3 210 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-219ENST00000530404 ARL2-SNX15V9GYD0 113 aa13.7□□□□□ -0.22
TSPAN4-219ENST00000530404 FAT3Q8TDW7 4589 aa13.7□□□□□ -0.22
TSPAN4-219ENST00000530404 PKHD1L1Q86WI1 4243 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 H3BVH4 76 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 MBP02144 154 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 C1QBP02746 253 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 ASIPP42127 132 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 UBE2G2P60604 165 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 SAPCD1Q5SSQ6 148 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 ZFP2Q6ZN57 461 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 Q6ZSA8 131 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 LINC00528Q8N1L1 170 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 AQP10Q96PS8 301 aa13.69□□□□□ -0.22
TSPAN4-219ENST00000530404 TRAV8-3A0A0A6YYJ7 113 aa13.68□□□□□ -0.22
TSPAN4-219ENST00000530404 SERF2P84101 59 aa13.68□□□□□ -0.22
TSPAN4-219ENST00000530404 UFSP1Q6NVU6 142 aa13.68□□□□□ -0.22
TSPAN4-219ENST00000530404 ZNF726P1Q15940 193 aa13.67□□□□□ -0.22
TSPAN4-219ENST00000530404 Q5BKY6 102 aa13.67□□□□□ -0.22
TSPAN4-219ENST00000530404 DMRTA1Q5VZB9 504 aa13.67□□□□□ -0.22
TSPAN4-219ENST00000530404 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
TSPAN4-219ENST00000530404 FABP5P3A8MUU1 101 aa13.66□□□□□ -0.22
TSPAN4-219ENST00000530404 B4DEV8 164 aa13.66□□□□□ -0.22
TSPAN4-219ENST00000530404 M0R036 132 aa13.66□□□□□ -0.22
TSPAN4-219ENST00000530404 IFNA7P01567 189 aa13.66□□□□□ -0.22
TSPAN4-219ENST00000530404 PLA2G1BP04054 148 aaKnown RBP13.66□□□□□ -0.22
TSPAN4-219ENST00000530404 Q86TA4 180 aa13.66□□□□□ -0.22
TSPAN4-219ENST00000530404 TNFSF18Q9UNG2 199 aa13.66□□□□□ -0.22
TSPAN4-219ENST00000530404 GRIFINA4D1Z8 144 aa13.65□□□□□ -0.22
TSPAN4-219ENST00000530404 PEX7O00628 323 aa13.65□□□□□ -0.22
TSPAN4-219ENST00000530404 FAM74A4Q5TZK3 123 aa13.65□□□□□ -0.22
TSPAN4-219ENST00000530404 RPL7L1Q6DKI1 246 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-219ENST00000530404 IL36BQ9NZH7 164 aa13.65□□□□□ -0.22
TSPAN4-219ENST00000530404 CRIP1P50238 77 aa13.64□□□□□ -0.23
TSPAN4-219ENST00000530404 FGF8P55075 233 aaPredicted RBP13.64□□□□□ -0.23
TSPAN4-219ENST00000530404 TOR2AQ5JU69 321 aa13.64□□□□□ -0.23
TSPAN4-219ENST00000530404 ZC2HC1AQ96GY0 325 aa13.64□□□□□ -0.23
TSPAN4-219ENST00000530404 IGKV2D-24A0A075B6R9 120 aa13.63□□□□□ -0.23
TSPAN4-219ENST00000530404 A0A087WWL8 130 aa13.63□□□□□ -0.23
TSPAN4-219ENST00000530404 ARMS2P0C7Q2 107 aa13.63□□□□□ -0.23
TSPAN4-219ENST00000530404 PIK3CD-AS1Q5SR53 167 aa13.63□□□□□ -0.23
TSPAN4-219ENST00000530404 MED28Q9H204 178 aa13.63□□□□□ -0.23
TSPAN4-219ENST00000530404 KLK12Q9UKR0 248 aa13.63□□□□□ -0.23
TSPAN4-219ENST00000530404 A0A087WWC5 75 aa13.62□□□□□ -0.23
TSPAN4-219ENST00000530404 KRBOX1C9JBD0 128 aa13.62□□□□□ -0.23
TSPAN4-219ENST00000530404 SH2D1AO60880 128 aa13.62□□□□□ -0.23
TSPAN4-219ENST00000530404 SCXQ7RTU7 201 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms