RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 NCOA6Q14686 2063 aaPredicted RBP12.04□□□□□ -0.48
PCDHA4-203ENST00000530339 ODF3L1Q8IXM7 274 aa12.04□□□□□ -0.48
PCDHA4-203ENST00000530339 C2orf70A6NJV1 201 aa12.03□□□□□ -0.48
PCDHA4-203ENST00000530339 B5MCH6 92 aa12.03□□□□□ -0.48
PCDHA4-203ENST00000530339 P0C879 139 aa12.03□□□□□ -0.48
PCDHA4-203ENST00000530339 CGB3P0DN86 165 aa12.03□□□□□ -0.48
PCDHA4-203ENST00000530339 WFDC2Q14508 124 aa12.03□□□□□ -0.48
PCDHA4-203ENST00000530339 DKK4Q9UBT3 224 aa12.03□□□□□ -0.48
PCDHA4-203ENST00000530339 PRSS47A8MTI9 375 aa12.02□□□□□ -0.48
PCDHA4-203ENST00000530339 MED14OSP0DP75 135 aa12.02□□□□□ -0.48
PCDHA4-203ENST00000530339 TEN1Q86WV5 123 aa12.02□□□□□ -0.48
PCDHA4-203ENST00000530339 SPANXCQ9NY87 97 aa12.02□□□□□ -0.48
PCDHA4-203ENST00000530339 F6UB75 175 aa12.02□□□□□ -0.49
PCDHA4-203ENST00000530339 HERV-K104P63124 156 aa12.02□□□□□ -0.49
PCDHA4-203ENST00000530339 TTTY13Q9BZ97 58 aa12.02□□□□□ -0.49
PCDHA4-203ENST00000530339 SPRY4Q9C004 299 aa12.02□□□□□ -0.49
PCDHA4-203ENST00000530339 TMEM89A2RUT3 159 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 TRACP01848 142 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 CRYGCP07315 174 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 C9orf66Q5T8R8 295 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 YPEL4Q96NS1 127 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 IGHV7-81A0A0B4J1V7 117 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 TRAV12-1A0A0B4J245 112 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 WI2-2373I1.2A0A1W2PRP0 233 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 C19orf71A6NCJ1 209 aa12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 RPL39LQ96EH5 51 aaKnown RBP12.01□□□□□ -0.49
PCDHA4-203ENST00000530339 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
PCDHA4-203ENST00000530339 CGB7P0DN87 165 aa12□□□□□ -0.49
PCDHA4-203ENST00000530339 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
PCDHA4-203ENST00000530339 ACYP1P07311 99 aa12□□□□□ -0.49
PCDHA4-203ENST00000530339 RITA1Q96K30 269 aa12□□□□□ -0.49
PCDHA4-203ENST00000530339 G3V4G9 280 aa12□□□□□ -0.49
PCDHA4-203ENST00000530339 CTSGP08311 255 aa12□□□□□ -0.49
PCDHA4-203ENST00000530339 CTRLP40313 264 aa12□□□□□ -0.49
PCDHA4-203ENST00000530339 RPL32P62910 135 aaKnown RBP12□□□□□ -0.49
PCDHA4-203ENST00000530339 RNASE13Q5GAN3 156 aaKnown RBP12□□□□□ -0.49
PCDHA4-203ENST00000530339 CRYBA4P53673 196 aa11.99□□□□□ -0.49
PCDHA4-203ENST00000530339 C16orf54Q6UWD8 224 aa11.99□□□□□ -0.49
PCDHA4-203ENST00000530339 ZNF106Q9H2Y7 1883 aaKnown RBP11.99□□□□□ -0.49
PCDHA4-203ENST00000530339 A0A1B0GXF2 115 aa11.99□□□□□ -0.49
PCDHA4-203ENST00000530339 NKAPP1Q8N9T2 125 aa11.99□□□□□ -0.49
PCDHA4-203ENST00000530339 ZNF295-AS1Q8N0V1 137 aa11.99□□□□□ -0.49
PCDHA4-203ENST00000530339 ZNF503Q96F45 646 aa11.98□□□□□ -0.49
PCDHA4-203ENST00000530339 A4D1N5 150 aa11.98□□□□□ -0.49
PCDHA4-203ENST00000530339 K7EMT4 169 aa11.98□□□□□ -0.49
PCDHA4-203ENST00000530339 Q6ZPA2 131 aa11.98□□□□□ -0.49
PCDHA4-203ENST00000530339 BUB3O43684 328 aa11.98□□□□□ -0.49
PCDHA4-203ENST00000530339 MRPL36Q9P0J6 103 aaKnown RBP11.98□□□□□ -0.49
PCDHA4-203ENST00000530339 HAMPP81172 84 aa11.98□□□□□ -0.49
PCDHA4-203ENST00000530339 ZFP2Q6ZN57 461 aa11.98□□□□□ -0.49
PCDHA4-203ENST00000530339 SPRY2O43597 315 aa11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 IGLV2-23P01705 113 aa11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 ODF1Q14990 250 aa11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 SS18L2Q9UHA2 77 aa11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 CFHR3Q02985 330 aa11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 FOXI1Q12951 378 aa11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 ZGRF1Q86YA3 2104 aa11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 HOXD3P31249 432 aaPredicted RBP11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 FREM1Q5H8C1 2179 aa11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 TNRC6AQ8NDV7 1962 aaKnown RBP11.97□□□□□ -0.49
PCDHA4-203ENST00000530339 NXPH4O95158 308 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 IGLV2-8P01709 118 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 SUMO4Q6EEV6 95 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 C9orf47Q6ZRZ4 202 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 CITED1Q99966 193 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 Q9H8V8 135 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 E9PLD3 99 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 BAALC-AS2P0C853 105 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 DAZAP2Q15038 168 aaPredicted RBP11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 CRIP3Q6Q6R5 217 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 TEX22C9J3V5 150 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 IGLV1-47P01700 117 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 FBXL19-AS1Q494R0 122 aa11.96□□□□□ -0.49
PCDHA4-203ENST00000530339 OBSL1O75147 1896 aa11.96□□□□□ -0.5
PCDHA4-203ENST00000530339 E7EUB6 86 aa11.96□□□□□ -0.5
PCDHA4-203ENST00000530339 MUSTN1Q8IVN3 82 aa11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 CRLF1O75462 422 aa11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 LINC01620Q4KN68 170 aa11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 LTBP2Q14767 1821 aa11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 LINC00574Q9H8X3 128 aa11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 A0A0J9YXV3 536 aa11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 WT1P19544 449 aaPredicted RBP11.95□□□□□ -0.5
PCDHA4-203ENST00000530339 ALPK3Q96L96 1907 aa11.94□□□□□ -0.5
PCDHA4-203ENST00000530339 SLC25A29Q8N8R3 303 aa11.94□□□□□ -0.5
PCDHA4-203ENST00000530339 DYSFO75923 2080 aa11.94□□□□□ -0.5
PCDHA4-203ENST00000530339 Q8N9W7 124 aa11.94□□□□□ -0.5
PCDHA4-203ENST00000530339 CCL24O00175 119 aa11.94□□□□□ -0.5
PCDHA4-203ENST00000530339 TOMM6Q96B49 74 aa11.94□□□□□ -0.5
PCDHA4-203ENST00000530339 BRWD1-AS2P59051 145 aa11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 TINCRA0A1B0GVN0 87 aa11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 PRAC2D3DTV9 90 aa11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 RBMY1FQ15415 496 aaKnown RBP11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 IGKV2-29A2NJV5 120 aaPredicted RBP11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 C5orf56Q8N8D9 126 aa11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 BAALCQ8WXS3 180 aa11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 PCNX2A6NKB5 2137 aa11.93□□□□□ -0.5
PCDHA4-203ENST00000530339 C16orf74Q96GX8 76 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms