RNA–Protein interactions for RNA: ENST00000529182.5

VPS28-210, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2 BASIC

Gene VPS28, Length 1,010 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-210ENST00000529182 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
VPS28-210ENST00000529182 TRAV4A0A0B4J268 109 aa9.3□□□□□ -0.92
VPS28-210ENST00000529182 TRGV4A0A0C4DH28 118 aa9.3□□□□□ -0.92
VPS28-210ENST00000529182 ARMS2P0C7Q2 107 aa9.3□□□□□ -0.92
VPS28-210ENST00000529182 MGST1P10620 155 aaKnown RBP9.3□□□□□ -0.92
VPS28-210ENST00000529182 GNG4P50150 75 aa9.3□□□□□ -0.92
VPS28-210ENST00000529182 TOR2AQ5JU69 321 aa9.3□□□□□ -0.92
VPS28-210ENST00000529182 ZNF506Q5JVG8 444 aa9.3□□□□□ -0.92
VPS28-210ENST00000529182 OR4C5Q8NGB2 326 aa9.3□□□□□ -0.92
VPS28-210ENST00000529182 PAX4O43316 350 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 CRYBA4P53673 196 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 IFITM2Q01629 132 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 DNLZQ5SXM8 178 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 TEX261Q6UWH6 196 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 PRO0255Q9UI72 69 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 HHLA3Q9XRX5 114 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
VPS28-210ENST00000529182 A0A096LPF7 62 aa9.28□□□□□ -0.92
VPS28-210ENST00000529182 IGHV3-73A0A0B4J1V6 119 aa9.28□□□□□ -0.92
VPS28-210ENST00000529182 H3BNG1 76 aa9.28□□□□□ -0.92
VPS28-210ENST00000529182 RS1O15537 224 aa9.28□□□□□ -0.92
VPS28-210ENST00000529182 CFAP126Q5VTH2 177 aa9.28□□□□□ -0.92
VPS28-210ENST00000529182 JPT2Q9H910 190 aa9.28□□□□□ -0.92
VPS28-210ENST00000529182 CEBPGP53567 150 aa9.27□□□□□ -0.93
VPS28-210ENST00000529182 RNF212Q495C1 297 aa9.27□□□□□ -0.93
VPS28-210ENST00000529182 DMRTA1Q5VZB9 504 aa9.27□□□□□ -0.93
VPS28-210ENST00000529182 PTH2Q96A98 100 aa9.27□□□□□ -0.93
VPS28-210ENST00000529182 FAM210AQ96ND0 272 aa9.27□□□□□ -0.93
VPS28-210ENST00000529182 EIF5A2Q9GZV4 153 aaKnown RBP9.27□□□□□ -0.93
VPS28-210ENST00000529182 PARLQ9H300 379 aa9.27□□□□□ -0.93
VPS28-210ENST00000529182 LINC00588Q9Y4M8 146 aa9.27□□□□□ -0.93
VPS28-210ENST00000529182 EPPK1P58107 5090 aaKnown RBP9.27□□□□□ -0.93
VPS28-210ENST00000529182 NACAE9PAV3 2078 aa9.27□□□□□ -0.93
VPS28-210ENST00000529182 FRAS1Q86XX4 4008 aa9.26□□□□□ -0.93
VPS28-210ENST00000529182 IGLV2-18A0A075B6J9 118 aa9.26□□□□□ -0.93
VPS28-210ENST00000529182 LOC100131303A0A0U1RQF7 123 aa9.26□□□□□ -0.93
VPS28-210ENST00000529182 M0R2N4 97 aa9.26□□□□□ -0.93
VPS28-210ENST00000529182 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
VPS28-210ENST00000529182 SLAQ13239 276 aa9.26□□□□□ -0.93
VPS28-210ENST00000529182 ESRGQ1W209 222 aa9.26□□□□□ -0.93
VPS28-210ENST00000529182 SCRT2Q9NQ03 307 aa9.26□□□□□ -0.93
VPS28-210ENST00000529182 MUC21A0A0G2JKD1 596 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 MUC21A0A140T8X8 626 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 C19orf71A6NCJ1 209 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 TMEM250H0YL14 139 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 M0R381 172 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 GZMBP10144 247 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 GYPEP15421 78 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 CCL18P55774 89 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 SMIM12Q96EX1 92 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 SAMD10Q9BYL1 202 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 PHLDA3Q9Y5J5 127 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 ICOSQ9Y6W8 199 aa9.25□□□□□ -0.93
VPS28-210ENST00000529182 K7EN84 100 aa9.24□□□□□ -0.93
VPS28-210ENST00000529182 K7EQD1 137 aa9.24□□□□□ -0.93
VPS28-210ENST00000529182 Q6ZSN1 163 aa9.24□□□□□ -0.93
VPS28-210ENST00000529182 SYT8Q8NBV8 401 aa9.24□□□□□ -0.93
VPS28-210ENST00000529182 OR10AG1Q8NH19 301 aa9.24□□□□□ -0.93
VPS28-210ENST00000529182 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
VPS28-210ENST00000529182 DAZAP1Q96EP5 407 aaKnown RBP9.24□□□□□ -0.93
VPS28-210ENST00000529182 A8MWV9 139 aa9.23□□□□□ -0.93
VPS28-210ENST00000529182 SRP19P09132 144 aaKnown RBP9.23□□□□□ -0.93
VPS28-210ENST00000529182 CXCL1P09341 107 aa9.23□□□□□ -0.93
VPS28-210ENST00000529182 MED14OSP0DP75 135 aa9.23□□□□□ -0.93
VPS28-210ENST00000529182 PIK3CD-AS1Q5SR53 167 aa9.23□□□□□ -0.93
VPS28-210ENST00000529182 SLC25A29Q8N8R3 303 aa9.23□□□□□ -0.93
VPS28-210ENST00000529182 OR2D3Q8NGH3 330 aa9.23□□□□□ -0.93
VPS28-210ENST00000529182 ZNRF2Q8NHG8 242 aa9.23□□□□□ -0.93
VPS28-210ENST00000529182 A0A087WWL8 130 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 SNAI2O43623 268 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 P01737 135 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 SRIP30626 198 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 FAM3BP58499 235 aaPredicted RBP9.22□□□□□ -0.93
VPS28-210ENST00000529182 SSTP61278 116 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 SRSF3P84103 164 aaKnown RBP9.22□□□□□ -0.93
VPS28-210ENST00000529182 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
VPS28-210ENST00000529182 FAM74A4Q5TZK3 123 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 UFSP1Q6NVU6 142 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 ZFP82Q8N141 532 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 NUDT10Q8NFP7 164 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 NUDT11Q96G61 164 aa9.22□□□□□ -0.93
VPS28-210ENST00000529182 SSBP4Q9BWG4 385 aaPredicted RBP9.22□□□□□ -0.93
VPS28-210ENST00000529182 RNASE7Q9H1E1 156 aaKnown RBP9.22□□□□□ -0.93
VPS28-210ENST00000529182 C9JQL5 133 aa9.21□□□□□ -0.94
VPS28-210ENST00000529182 CIDEAO60543 219 aa9.21□□□□□ -0.94
VPS28-210ENST00000529182 ZFP2Q6ZN57 461 aa9.21□□□□□ -0.94
VPS28-210ENST00000529182 SFRP2Q96HF1 295 aa9.21□□□□□ -0.94
VPS28-210ENST00000529182 TPPP3Q9BW30 176 aa9.21□□□□□ -0.94
VPS28-210ENST00000529182 BIN3Q9NQY0 253 aa9.21□□□□□ -0.94
VPS28-210ENST00000529182 TRBV6-4A0A1B0GX49 114 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 NXPH4O95158 308 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 OR5AL1P0C617 328 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 IGLC6P0CF74 106 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 RHOHQ15669 191 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 NEGR1Q7Z3B1 354 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 FER1L6-AS1Q8NA97 138 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 SMIM7Q9BQ49 75 aa9.2□□□□□ -0.94
VPS28-210ENST00000529182 Q9UF83 564 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms