RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 S4R3C0 116 aa2.31□□□□□ -2.04
CD44-219ENST00000525685 NIPBLQ6KC79 2804 aaeCLIP2.3□□□□□ -2.04
CD44-219ENST00000525685 IGHV3-21A0A0B4J1V1 117 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 IGHV3-74A0A0B4J1X5 117 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 DUXBA0A1W2PPF3 345 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 TMEM218A2RU14 115 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 K7EIM0 57 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 K7EN84 100 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 OVOL1O14753 267 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 UPK1BO75841 260 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 TLX1NBP0CAT3 122 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 SULT1A3P0DMM9 295 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 SULT1A4P0DMN0 295 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 OR13C7P0DN81 318 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 RNASE2P10153 161 aaKnown RBP2.3□□□□□ -2.04
CD44-219ENST00000525685 SULT1A1P50225 295 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 SULT1A2P50226 295 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 UBE2MP61081 183 aaKnown RBP2.3□□□□□ -2.04
CD44-219ENST00000525685 ATP5G2Q06055 141 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 DHRS2Q13268 280 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 RPEL1Q2QD12 228 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 TMEM97Q5BJF2 176 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 NMSQ5H8A3 153 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 FAM74A1Q5RGS3 127 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 AKR1C8PQ5T2L2 129 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 KPRPQ5T749 579 aaPredicted RBP2.3□□□□□ -2.04
CD44-219ENST00000525685 LAMTOR1Q6IAA8 161 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 FA2HQ7L5A8 372 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 LYZL2Q7Z4W2 148 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 UBAC2Q8NBM4 344 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 OR1S2Q8NGQ3 325 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 OR13C6PQ8NH95 151 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 BAALCQ8WXS3 180 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 HIST1H2BAQ96A08 127 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 EEF1AKMT3Q96AZ1 226 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 DNAJC30Q96LL9 226 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 LINC00477Q96M19 166 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 SIGMAR1Q99720 223 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 MARVELD1Q9BSK0 173 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 ZNF436Q9C0F3 470 aaPredicted RBP2.3□□□□□ -2.04
CD44-219ENST00000525685 SPANXCQ9NY87 97 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 FKBP11Q9NYL4 201 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 DNAH3Q8TD57 4116 aa2.3□□□□□ -2.04
CD44-219ENST00000525685 A0A087WX48 190 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 TINCRA0A1B0GVN0 87 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 CEBPZOSA8MTT3 80 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 I3L2K1 104 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 GNG7O60262 68 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 OR7C2O60412 319 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 PITX3O75364 302 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 APOC3P02656 99 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 SMIM17P0DL12 118 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 DEFA4P12838 97 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 TCL1AP56279 114 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 SYNJ2BPP57105 145 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 RHOBP62745 196 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 ERHP84090 104 aaKnown RBP2.29□□□□□ -2.04
CD44-219ENST00000525685 ACTL10Q5JWF8 245 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 CLEC19AQ6UXS0 136 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 SVBPQ8N300 66 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 OR1S1Q8NH92 325 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 GPR82Q96P67 336 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 GINS3Q9BRX5 216 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 ACTR3CQ9C0K3 210 aaPredicted RBP2.29□□□□□ -2.04
CD44-219ENST00000525685 ENY2Q9NPA8 101 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 C21orf62Q9NYP8 219 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 MRPL36Q9P0J6 103 aaKnown RBP2.29□□□□□ -2.04
CD44-219ENST00000525685 HSPB8Q9UJY1 196 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 PLXNB1O43157 2135 aa2.29□□□□□ -2.04
CD44-219ENST00000525685 ATRQ13535 2644 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 TRBV7-1A0A0A6YYK4 115 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 BORCS7-ASMTA0A0B4J1R7 106 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 PIGBOS1A0A0B4J2F0 54 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 A0A1W2PRE2 83 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 C7orf66A4D0T2 115 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 MAP1LC3B2A6NCE7 125 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 OR2T8A6NH00 312 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 K7EIL1 84 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 LGALS9O00182 355 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 SSSCA1O60232 199 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 IGLV1-51P01701 117 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 IL5P05113 134 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 CRYGDP07320 174 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 IAPPP10997 89 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 SLC25A6P12236 298 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 SPNP16150 400 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 SNCAP37840 140 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 OPRK1P41145 380 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 TAS2R30P59541 319 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 EIF5AP63241 154 aaKnown RBP2.28□□□□□ -2.04
CD44-219ENST00000525685 JOSD1Q15040 202 aaPredicted RBP2.28□□□□□ -2.04
CD44-219ENST00000525685 RHEBQ15382 184 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 TAL2Q16559 108 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 Q56UQ5 140 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 FAM162BQ5T6X4 162 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 UNQ9165/PRO28630Q6UXU0 137 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 GPHB5Q86YW7 130 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 OR4X1Q8NH49 305 aa2.28□□□□□ -2.04
CD44-219ENST00000525685 ZNRF2Q8NHG8 242 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms