RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 BGLAPP02818 100 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 IL4P05112 153 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 GYPEP15421 78 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 LGALS3P17931 250 aaKnown RBP5.78□□□□□ -1.48
HDAC3-216ENST00000523088 AQP1P29972 269 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 GCHFRP30047 84 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 KRTAP1-1Q07627 177 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 CENPWQ5EE01 88 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 LINC00114Q6XXX2 140 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 ZNF525Q8N782 197 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 LINC01356Q8N9X3 169 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 NXT2Q9NPJ8 142 aaKnown RBP5.78□□□□□ -1.48
HDAC3-216ENST00000523088 LINC00527Q9UJ94 153 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 ATRQ13535 2644 aa5.78□□□□□ -1.48
HDAC3-216ENST00000523088 A0A096LNT2 108 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 TRBV27A0A0K0K1C4 114 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 FXYD2P54710 66 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 FAM120AOSQ5T036 256 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 MDP1Q86V88 176 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 FAM19A2Q8N3H0 131 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 TMEM252Q8N6L7 170 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 RFESDQ8TAC1 157 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 FAM3DQ96BQ1 224 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 PLEKHA3Q9HB20 300 aa5.77□□□□□ -1.49
HDAC3-216ENST00000523088 MYMXA0A1B0GTQ4 84 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 CPSF4LA6NMK7 179 aaKnown RBP5.76□□□□□ -1.49
HDAC3-216ENST00000523088 C15orf62A8K5M9 175 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 UBE2L6O14933 153 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 BCE1O60756 84 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 TMEM30BQ3MIR4 351 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 PDPNQ86YL7 162 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 RPP25LQ8N5L8 163 aaKnown RBP5.76□□□□□ -1.49
HDAC3-216ENST00000523088 NHP2Q9NX24 153 aaKnown RBP5.76□□□□□ -1.49
HDAC3-216ENST00000523088 CALYQ9NYX4 217 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 ANAPC10Q9UM13 185 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 TIMM9Q9Y5J7 89 aa5.76□□□□□ -1.49
HDAC3-216ENST00000523088 COL6A5A8TX70 2615 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 IGHV3OR15-7A0A075B7D8 119 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 PIGBOS1A0A0B4J2F0 54 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 SRSF10O75494 262 aaKnown RBP5.75□□□□□ -1.49
HDAC3-216ENST00000523088 IGHV4-31P0DP07 118 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 CRYBA2P53672 197 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 PCBD1P61457 104 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 SDIM1Q6ZPB5 146 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-216ENST00000523088 MAPK1IP1LQ8NDC0 245 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 METTL26Q96S19 204 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 BPESC1Q9GZL8 116 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 C11orf1Q9H5F2 150 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 FAM30AQ9NZY2 134 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 SELENOKQ9Y6D0 94 aa5.75□□□□□ -1.49
HDAC3-216ENST00000523088 C9JCJ5 164 aa5.74□□□□□ -1.49
HDAC3-216ENST00000523088 HOXA3O43365 443 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-216ENST00000523088 SUPT4H1P63272 117 aaKnown RBP5.74□□□□□ -1.49
HDAC3-216ENST00000523088 RPL18Q07020 188 aaKnown RBP5.74□□□□□ -1.49
HDAC3-216ENST00000523088 C10orf128Q5T292 105 aa5.74□□□□□ -1.49
HDAC3-216ENST00000523088 PHF5AQ7RTV0 110 aaKnown RBP5.74□□□□□ -1.49
HDAC3-216ENST00000523088 TMEM230Q96A57 120 aa5.74□□□□□ -1.49
HDAC3-216ENST00000523088 IFI27L1Q96BM0 104 aa5.74□□□□□ -1.49
HDAC3-216ENST00000523088 EPDR1Q9UM22 224 aa5.74□□□□□ -1.49
HDAC3-216ENST00000523088 TANC2Q9HCD6 1990 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 MXRA5Q9NR99 2828 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 IGLV3-9A0A075B6K5 115 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 B4DSR2 109 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 INS-IGF2F8WCM5 200 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 PPYP01298 95 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 ZNF823P16415 610 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 MYCNOSP40205 109 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 SNRPD3P62318 126 aaKnown RBP5.73□□□□□ -1.49
HDAC3-216ENST00000523088 TMEM155Q4W5P6 130 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 UNQ9165/PRO28630Q6UXU0 137 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 ATP5L2Q7Z4Y8 100 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 OR8A1Q8NGG7 326 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 LYZL4Q96KX0 146 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 FANCD2OSQ96PS1 177 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 C11orf68Q9H3H3 251 aaKnown RBP5.73□□□□□ -1.49
HDAC3-216ENST00000523088 OSTCQ9NRP0 149 aa5.73□□□□□ -1.49
HDAC3-216ENST00000523088 WNK2Q9Y3S1 2297 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 A0A0A6YYD4 124 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 IGHV4-61A0A0C4DH41 118 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 ZNF503-AS2A6NEH8 195 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 LINC00473A8K010 186 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 M0R378 163 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 SLC25A20O43772 301 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 HBDP02042 147 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 MED14OSP0DP75 135 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 HERVK_113P61574 105 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 ZNF56Q15929 161 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 FAM27BQ5VT28 67 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 FAM104BQ5XKR9 115 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 ZFP2Q6ZN57 461 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 STPG3Q8N7X2 389 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 CCL17Q92583 94 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 WFDC6Q9BQY6 131 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 CTSZQ9UBR2 303 aa5.72□□□□□ -1.49
HDAC3-216ENST00000523088 ANK3Q12955 4377 aaKnown RBP5.71□□□□□ -1.49
HDAC3-216ENST00000523088 DNHD1Q96M86 4753 aa5.71□□□□□ -1.49
HDAC3-216ENST00000523088 TRBV5-5A0A0J9YX44 114 aa5.71□□□□□ -1.5
HDAC3-216ENST00000523088 CTXND1A0A1B0GTU2 59 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms