RNA–Protein interactions for RNA: ENST00000522567.5

LRRCC1-204, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,122 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-204ENST00000522567 PTPN13Q12923 2485 aa12.99□□□□□ -0.33
LRRCC1-204ENST00000522567 IGHV4-4A0A075B6R2 117 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 IGHV7-4-1A0A0J9YVY3 117 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 C9JAW5 83 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 TMEM155Q4W5P6 130 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 IGFL4Q6B9Z1 124 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 C1orf122Q6ZSJ8 110 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 ODF3Q96PU9 254 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 ONECUT1Q9UBC0 465 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 PRO1854Q9UHT4 67 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 POLEQ07864 2286 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 IGHV1-3A0A0C4DH29 117 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 LOXP28300 417 aaPredicted RBP12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 DYNAPQ8N1N2 210 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 MDFICQ9P1T7 246 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 FAM215AQ9Y5M1 114 aa12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 SPTAN1Q13813 2472 aaKnown RBP12.98□□□□□ -0.33
LRRCC1-204ENST00000522567 USP9YO00507 2555 aaPredicted RBP12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 CCL8P80075 99 aa12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 Q8N1Y9 231 aa12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 KLK15Q9H2R5 256 aa12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 HIF1ANQ9NWT6 349 aa12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 NDUFB3O43676 98 aa12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 LYPD2Q6UXB3 125 aa12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 Q6ZQT7 251 aa12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 SEM1Q6ZVN7 128 aa12.97□□□□□ -0.33
LRRCC1-204ENST00000522567 CLEC3BP05452 202 aa12.96□□□□□ -0.33
LRRCC1-204ENST00000522567 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
LRRCC1-204ENST00000522567 IGLV1-47P01700 117 aa12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 RPL13AP40429 203 aaKnown RBP12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 SLC25A29Q8N8R3 303 aa12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 SLC50A1Q9BRV3 221 aa12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 S4R3C0 116 aa12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 F8W735 103 aaPredicted RBP12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 ARL3P36405 182 aa12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 Q6ZS46 218 aa12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 TRPT1Q86TN4 253 aaKnown RBP12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 NTN5Q8WTR8 489 aaPredicted RBP12.95□□□□□ -0.34
LRRCC1-204ENST00000522567 SPTBN1Q01082 2364 aaKnown RBP12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 RBAKDNA6NC62 111 aa12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 MEIG1Q5JSS6 88 aa12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 P0DMU3 169 aa12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 FAM231AP0DMU4 169 aa12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 FAM231CP0DMU5 169 aa12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 C2orf66Q6UXQ4 117 aa12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 C15orf53Q8NAA6 179 aa12.94□□□□□ -0.34
LRRCC1-204ENST00000522567 TMEM178BH3BS89 294 aa12.93□□□□□ -0.34
LRRCC1-204ENST00000522567 MFAP4P55083 255 aa12.93□□□□□ -0.34
LRRCC1-204ENST00000522567 SUMO2P61956 95 aaKnown RBP12.93□□□□□ -0.34
LRRCC1-204ENST00000522567 RNF5Q99942 180 aa12.93□□□□□ -0.34
LRRCC1-204ENST00000522567 CRYGDP07320 174 aa12.92□□□□□ -0.34
LRRCC1-204ENST00000522567 VPREB3Q9UKI3 123 aa12.92□□□□□ -0.34
LRRCC1-204ENST00000522567 NBPF19A0A087WUL8 3843 aa12.92□□□□□ -0.34
LRRCC1-204ENST00000522567 IGLV4-69A0A075B6H9 119 aa12.92□□□□□ -0.34
LRRCC1-204ENST00000522567 TRAV8-4A0A0B4J246 113 aa12.92□□□□□ -0.34
LRRCC1-204ENST00000522567 BUB1B-PAK6H3BSN5 160 aa12.92□□□□□ -0.34
LRRCC1-204ENST00000522567 IGHV3-33P01772 117 aa12.92□□□□□ -0.34
LRRCC1-204ENST00000522567 TIMD4Q96H15 378 aa12.92□□□□□ -0.34
LRRCC1-204ENST00000522567 C11orf86A6NJI1 115 aa12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 EIF4EBP3O60516 100 aaPredicted RBP12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 HERVK_113P61574 105 aa12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 FANCD2OSQ96PS1 177 aa12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 TMEM126AQ9H061 195 aa12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 CYSRT1A8MQ03 144 aa12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 SPANXN1Q5VSR9 72 aa12.91□□□□□ -0.34
LRRCC1-204ENST00000522567 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
LRRCC1-204ENST00000522567 C17orf100A8MU93 164 aa12.9□□□□□ -0.34
LRRCC1-204ENST00000522567 TSPEAR-AS2P59090 65 aa12.9□□□□□ -0.34
LRRCC1-204ENST00000522567 PAPPA-AS1Q5QFB9 102 aa12.9□□□□□ -0.34
LRRCC1-204ENST00000522567 HIST2H2BCQ6DN03 193 aa12.9□□□□□ -0.34
LRRCC1-204ENST00000522567 AMELXQ99217 191 aa12.9□□□□□ -0.34
LRRCC1-204ENST00000522567 DLX1P56177 255 aa12.89□□□□□ -0.35
LRRCC1-204ENST00000522567 LINC01620Q4KN68 170 aa12.89□□□□□ -0.35
LRRCC1-204ENST00000522567 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
LRRCC1-204ENST00000522567 YAE1D1Q9NRH1 226 aa12.89□□□□□ -0.35
LRRCC1-204ENST00000522567 TEX49A0A1B0GTD5 131 aa12.89□□□□□ -0.35
LRRCC1-204ENST00000522567 NUP37Q8NFH4 326 aa12.89□□□□□ -0.35
LRRCC1-204ENST00000522567 KAAG1Q9UBP8 84 aa12.89□□□□□ -0.35
LRRCC1-204ENST00000522567 A0A0B4J2C4 111 aa12.88□□□□□ -0.35
LRRCC1-204ENST00000522567 A0A0G2JNJ9 132 aa12.88□□□□□ -0.35
LRRCC1-204ENST00000522567 LGALS9O00182 355 aa12.88□□□□□ -0.35
LRRCC1-204ENST00000522567 ATXN8Q156A1 80 aa12.88□□□□□ -0.35
LRRCC1-204ENST00000522567 LINC01587Q99440 93 aa12.88□□□□□ -0.35
LRRCC1-204ENST00000522567 AGPAT4-IT1Q9H0P7 198 aa12.88□□□□□ -0.35
LRRCC1-204ENST00000522567 Q9UFV3 132 aa12.88□□□□□ -0.35
LRRCC1-204ENST00000522567 PCNX1Q96RV3 2341 aa12.87□□□□□ -0.35
LRRCC1-204ENST00000522567 DOPEY1Q5JWR5 2465 aa12.87□□□□□ -0.35
LRRCC1-204ENST00000522567 TRAV2A0A0B4J234 112 aa12.87□□□□□ -0.35
LRRCC1-204ENST00000522567 A4D1N5 150 aa12.87□□□□□ -0.35
LRRCC1-204ENST00000522567 TIMM23O14925 209 aa12.87□□□□□ -0.35
LRRCC1-204ENST00000522567 C22orf34Q6ZV56 151 aa12.87□□□□□ -0.35
LRRCC1-204ENST00000522567 C21orf62Q9NYP8 219 aa12.87□□□□□ -0.35
LRRCC1-204ENST00000522567 TRBV10-2A0A0K0K1G8 114 aa12.86□□□□□ -0.35
LRRCC1-204ENST00000522567 TSHBP01222 138 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms