RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 F6UB75 175 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 TEX46H3BTG2 121 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 M0R3E3 92 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 HBE1P02100 147 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 HLA-DRB4P13762 266 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 CSN1S1P47710 185 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 PPT1P50897 306 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 APOC4P55056 127 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 FGF8P55075 233 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-209ENST00000521559 DEFB1P60022 68 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 HIST1H1AQ02539 215 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-209ENST00000521559 FAM74A1Q5RGS3 127 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 GDF5OSQ5U4N7 250 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 Q6ZVH6 145 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 SSX7Q7RTT5 188 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 IQCF2Q8IXL9 164 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 KIR2DL5AQ8N109 375 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 EXOC3-AS1Q8N2X6 119 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 OR4B1Q8NGF8 309 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 OR10J6PQ8NGY7 276 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 KIR2DL5BQ8NHK3 375 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 LINC00477Q96M19 166 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 B9D2Q9BPU9 175 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 NKX6-2Q9C056 277 aaPredicted RBP2.22□□□□□ -2.05
VPS13B-209ENST00000521559 Q9H3A6 140 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 HLA-DRB4X5D2U9 266 aa2.22□□□□□ -2.05
VPS13B-209ENST00000521559 STAB1Q9NY15 2570 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 WNK1Q9H4A3 2382 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 SERTM2A0A1B0GWG4 89 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 RBAKDNA6NC62 111 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 FAM74A7A6NL05 159 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 GGTLC3B5MD39 225 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 F6UZH7 168 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 IFNA7P01567 189 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 SLC25A5P05141 298 aaKnown RBP2.21□□□□□ -2.06
VPS13B-209ENST00000521559 GIG44P09565 113 aaPredicted RBP2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF705DP0CH99 300 aaPredicted RBP2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF705BP0CI00 300 aaPredicted RBP2.21□□□□□ -2.06
VPS13B-209ENST00000521559 CT45A10P0DMU9 189 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 PRB4P10163 310 aaPredicted RBP2.21□□□□□ -2.06
VPS13B-209ENST00000521559 TSPOP30536 169 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 TAGLN2P37802 199 aaKnown RBP2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF138P52744 262 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 NUTF2P61970 127 aaKnown RBP2.21□□□□□ -2.06
VPS13B-209ENST00000521559 CCL20P78556 96 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ERCC8Q13216 396 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 FAM74A3Q4VXF1 159 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 TEX261Q6UWH6 196 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 AMTNQ6UX39 209 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ALKAL2Q6UX46 152 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 SBSPONQ8IVN8 264 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF680Q8NEM1 530 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 CMTM2Q8TAZ6 248 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ODF3Q96PU9 254 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 TM2D3Q9BRN9 247 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 TCEAL7Q9BRU2 100 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 AGPAT4-IT1Q9H0P7 198 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 EPDR1Q9UM22 224 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 TP53TG1Q9Y2A0 90 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 YTHDF2Q9Y5A9 579 aaKnown RBP2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ARL2-SNX15V9GYD0 113 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 CUBNO60494 3623 aa2.21□□□□□ -2.06
VPS13B-209ENST00000521559 ZFHX3Q15911 3703 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 IGKV2-40A0A087WW87 121 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-209ENST00000521559 TRBV6-1A0A0K0K1D8 114 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 A0A1B0GV50 99 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 K7EQM0 130 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 CRXO43186 299 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-209ENST00000521559 CA1P00915 261 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-209ENST00000521559 IFNA1P01562 189 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 IGKV2D-40P01614 121 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-209ENST00000521559 TCRAP04437 139 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 NMBP08949 121 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 CRISP2P16562 243 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 LEPP41159 167 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 ATP5G3P48201 142 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 FXYD7P58549 80 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 UBE2G2P60604 165 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 GNG5P63218 68 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 SPINK13Q1W4C9 94 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 LINC01620Q4KN68 170 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM78Q5T7P6 136 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 GOLT1AQ6ZVE7 132 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 C1orf158Q8N1D5 194 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 ZFAND2AQ8N6M9 145 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 CYB561D1Q8N8Q1 229 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 OR11H2Q8NH07 326 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 LYPD6BQ8NI32 183 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 GTSF1Q8WW33 167 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 HIST1H2BAQ96A08 127 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 TVP23CQ96ET8 276 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 FAM19A4Q96LR4 140 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 IGF2BP2-AS1Q96M15 143 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 TXNDC17Q9BRA2 123 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 SLC35B3Q9H1N7 401 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 MANBALQ9NQG1 85 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF492Q9P255 531 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 GNG13Q9P2W3 67 aa2.2□□□□□ -2.06
VPS13B-209ENST00000521559 XCL2Q9UBD3 114 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms