RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 APLNQ9ULZ1 77 aa12.76□□□□□ -0.37
VEGFA-222ENST00000520948 CXCL1P09341 107 aa12.75□□□□□ -0.37
VEGFA-222ENST00000520948 ASIPP42127 132 aa12.75□□□□□ -0.37
VEGFA-222ENST00000520948 OR5I1Q13606 314 aa12.75□□□□□ -0.37
VEGFA-222ENST00000520948 DNAH6Q9C0G6 4158 aa12.75□□□□□ -0.37
VEGFA-222ENST00000520948 BIN3Q9NQY0 253 aa12.75□□□□□ -0.37
VEGFA-222ENST00000520948 GRIFINA4D1Z8 144 aa12.74□□□□□ -0.37
VEGFA-222ENST00000520948 CEBPGP53567 150 aa12.74□□□□□ -0.37
VEGFA-222ENST00000520948 TCTAP57738 103 aa12.74□□□□□ -0.37
VEGFA-222ENST00000520948 RPL19P84098 196 aaKnown RBP12.74□□□□□ -0.37
VEGFA-222ENST00000520948 POM121L12Q8N7R1 296 aa12.74□□□□□ -0.37
VEGFA-222ENST00000520948 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
VEGFA-222ENST00000520948 SCRT2Q9NQ03 307 aa12.74□□□□□ -0.37
VEGFA-222ENST00000520948 KIAA1109Q2LD37 5005 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 PCLOQ9Y6V0 5065 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 TMSB15BA0A087X1C1 80 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 ZNF727A8MUV8 499 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 ARMS2P0C7Q2 107 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 FAM74A3Q4VXF1 159 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 NUDT10Q8NFP7 164 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 NUDT11Q96G61 164 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 FAM210BQ96KR6 192 aa12.73□□□□□ -0.37
VEGFA-222ENST00000520948 TRGV2A0A075B6R0 118 aa12.72□□□□□ -0.37
VEGFA-222ENST00000520948 HTN3P15516 51 aa12.72□□□□□ -0.37
VEGFA-222ENST00000520948 HOXA5P20719 270 aa12.72□□□□□ -0.37
VEGFA-222ENST00000520948 S100A4P26447 101 aaKnown RBP12.72□□□□□ -0.37
VEGFA-222ENST00000520948 PIK3CD-AS1Q5SR53 167 aa12.72□□□□□ -0.37
VEGFA-222ENST00000520948 DAZAP1Q96EP5 407 aaKnown RBP12.72□□□□□ -0.37
VEGFA-222ENST00000520948 NDUFAF3Q9BU61 184 aa12.72□□□□□ -0.37
VEGFA-222ENST00000520948 SSBP4Q9BWG4 385 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-222ENST00000520948 IGHV4-4A0A075B6R2 117 aa12.71□□□□□ -0.37
VEGFA-222ENST00000520948 MED14OSP0DP75 135 aa12.71□□□□□ -0.37
VEGFA-222ENST00000520948 ZNF876PQ49A33 203 aa12.71□□□□□ -0.37
VEGFA-222ENST00000520948 LINC01551Q86U37 167 aa12.71□□□□□ -0.37
VEGFA-222ENST00000520948 F5H768 121 aa12.7□□□□□ -0.38
VEGFA-222ENST00000520948 H3BVH4 76 aa12.7□□□□□ -0.38
VEGFA-222ENST00000520948 SNAI2O43623 268 aa12.7□□□□□ -0.38
VEGFA-222ENST00000520948 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
VEGFA-222ENST00000520948 TRAV4A0A0B4J268 109 aa12.69□□□□□ -0.38
VEGFA-222ENST00000520948 P01737 135 aa12.69□□□□□ -0.38
VEGFA-222ENST00000520948 FHL2Q14192 279 aa12.69□□□□□ -0.38
VEGFA-222ENST00000520948 TMEM241Q24JQ0 296 aa12.69□□□□□ -0.38
VEGFA-222ENST00000520948 OR2D3Q8NGH3 330 aa12.69□□□□□ -0.38
VEGFA-222ENST00000520948 ZNF479Q96JC4 524 aa12.69□□□□□ -0.38
VEGFA-222ENST00000520948 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
VEGFA-222ENST00000520948 RS1O15537 224 aa12.68□□□□□ -0.38
VEGFA-222ENST00000520948 OR5AL1P0C617 328 aa12.68□□□□□ -0.38
VEGFA-222ENST00000520948 IGLC6P0CF74 106 aa12.68□□□□□ -0.38
VEGFA-222ENST00000520948 RPS20P60866 119 aaKnown RBP12.68□□□□□ -0.38
VEGFA-222ENST00000520948 DMRTA1Q5VZB9 504 aa12.68□□□□□ -0.38
VEGFA-222ENST00000520948 TMEM88Q6PEY1 159 aa12.68□□□□□ -0.38
VEGFA-222ENST00000520948 NACAE9PAV3 2078 aa12.68□□□□□ -0.38
VEGFA-222ENST00000520948 SFTA3P0C7M3 94 aa12.67□□□□□ -0.38
VEGFA-222ENST00000520948 RPL23P62829 140 aaKnown RBP12.67□□□□□ -0.38
VEGFA-222ENST00000520948 SOHLH1Q5JUK2 328 aa12.67□□□□□ -0.38
VEGFA-222ENST00000520948 CFAP126Q5VTH2 177 aa12.67□□□□□ -0.38
VEGFA-222ENST00000520948 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
VEGFA-222ENST00000520948 H3BNG1 76 aa12.66□□□□□ -0.38
VEGFA-222ENST00000520948 IGHV3-53P01767 116 aa12.66□□□□□ -0.38
VEGFA-222ENST00000520948 GZMBP10144 247 aa12.66□□□□□ -0.38
VEGFA-222ENST00000520948 OR4C5Q8NGB2 326 aa12.66□□□□□ -0.38
VEGFA-222ENST00000520948 VSIG2Q96IQ7 327 aa12.66□□□□□ -0.38
VEGFA-222ENST00000520948 RPP21Q9H633 154 aaKnown RBP12.66□□□□□ -0.38
VEGFA-222ENST00000520948 PHLDA3Q9Y5J5 127 aa12.66□□□□□ -0.38
VEGFA-222ENST00000520948 CIDEAO60543 219 aa12.65□□□□□ -0.38
VEGFA-222ENST00000520948 NXPH4O95158 308 aa12.65□□□□□ -0.38
VEGFA-222ENST00000520948 ISOC2Q96AB3 205 aa12.65□□□□□ -0.38
VEGFA-222ENST00000520948 JPT2Q9H910 190 aa12.65□□□□□ -0.38
VEGFA-222ENST00000520948 OSTCQ9NRP0 149 aa12.65□□□□□ -0.38
VEGFA-222ENST00000520948 FAT2Q9NYQ8 4349 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 TRAV26-1A0A087WT03 109 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 XKRY2A2RUG3 117 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 LINC00862A6NCI5 91 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 GATCO43716 136 aaKnown RBP12.64□□□□□ -0.39
VEGFA-222ENST00000520948 SLAQ13239 276 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 UFSP1Q6NVU6 142 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 UQCC3Q6UW78 93 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 SYT8Q8NBV8 401 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 OR10AG1Q8NH19 301 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 SFRP2Q96HF1 295 aa12.64□□□□□ -0.39
VEGFA-222ENST00000520948 A8MWV9 139 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 CRYBA4P53673 196 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 ERVFC1-1P60608 527 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 LINC00336Q6ZUF6 198 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 ZFP82Q8N141 532 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 FER1L6-AS1Q8NA97 138 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 PRO0255Q9UI72 69 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 HHLA3Q9XRX5 114 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 DNAH2Q9P225 4427 aa12.63□□□□□ -0.39
VEGFA-222ENST00000520948 A0A1B0GVY2 172 aa12.62□□□□□ -0.39
VEGFA-222ENST00000520948 GATA1P15976 413 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-222ENST00000520948 CT83Q5H943 113 aa12.62□□□□□ -0.39
VEGFA-222ENST00000520948 ZFP2Q6ZN57 461 aa12.62□□□□□ -0.39
VEGFA-222ENST00000520948 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 A0A0J9YY99 117 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 A0A1W2PPQ1 181 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 F2Z2F3 143 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 M0R2N4 97 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 M0R381 172 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms