RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 MRPL23Q16540 153 aaKnown RBP2.02□□□□□ -2.09
MCF2-208ENST00000519895 TMEM78Q5T7P6 136 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 KCNIP4Q6PIL6 250 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 ZNF767PQ75MW2 155 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 TMEM183AQ8IXX5 376 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 C1orf158Q8N1D5 194 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 DEFB125Q8N687 156 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 OR5B12Q96R08 314 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 MLST8Q9BVC4 326 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 TRAV9-1A0A075B6T8 112 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 RAB19A4D1S5 217 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 RHODO00212 210 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 IGLV2-11P01706 119 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 ORM1P02763 201 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 CT45A10P0DMU9 189 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 UBE2L3P68036 154 aaKnown RBP2.02□□□□□ -2.09
MCF2-208ENST00000519895 PSMG4Q5JS54 123 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 RPL7L1Q6DKI1 246 aaKnown RBP2.02□□□□□ -2.09
MCF2-208ENST00000519895 MIR17HGQ75NE6 70 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 OR10G8Q8NGN5 311 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 DUX3Q96PT4 197 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 KRTAP9-3Q9BYQ3 159 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 IGHV1OR15-1A0A075B7D0 117 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 PLAC8L1A1L4L8 177 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 MAP1LC3B2A6NCE7 125 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 IFNA7P01567 189 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 NPSP0C0P6 89 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 LINC00694P0DN24 101 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 RPL32P62910 135 aaKnown RBP2.02□□□□□ -2.09
MCF2-208ENST00000519895 CCL20P78556 96 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 ZNF726P1Q15940 193 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 Q75L30 129 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 C11orf72Q8NBR9 251 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 ZNF738Q8NE65 137 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 OR11H4Q8NGC9 324 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 CMTM2Q8TAZ6 248 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 NIPSNAP3BQ9BS92 247 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 MAP1LC3BQ9GZQ8 125 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 VAX2Q9UIW0 290 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 CSDC2Q9Y534 153 aaKnown RBP2.02□□□□□ -2.09
MCF2-208ENST00000519895 FXYD6-FXYD2A0A087WZ82 144 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 TRAV4A0A0B4J268 109 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 TRBV10-1A0A0K0K1A3 114 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 H3BP45 60 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 PEX7O00628 323 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 TCAPO15273 167 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 RS1O15537 224 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 LY6G6CO95867 125 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 CA1P00915 261 aaPredicted RBP2.01□□□□□ -2.09
MCF2-208ENST00000519895 PFN1P07737 140 aaKnown RBP2.01□□□□□ -2.09
MCF2-208ENST00000519895 OR5AL1P0C617 328 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 RRN3P1Q2M238 152 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 ZFP69Q49AA0 526 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 SMUG1Q53HV7 270 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 C6orf226Q5I0X4 101 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 FAM24BQ8N5W8 94 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 DNAJC30Q96LL9 226 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 IMMP2LQ96T52 175 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 RARRES2Q99969 163 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 AGPAT4-IT1Q9H0P7 198 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 IL36BQ9NZH7 164 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 FABP5P3A8MUU1 101 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 F2Z2F3 143 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 ARL14EPLP0DKL9 152 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 APELAP0DMC3 54 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 SRIP30626 198 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 FLI1Q01543 452 aaPredicted RBP2.01□□□□□ -2.09
MCF2-208ENST00000519895 UFSP1Q6NVU6 142 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 SSX7Q7RTT5 188 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 Q86TA4 180 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 BTF3L4Q96K17 158 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 SDF2L1Q9HCN8 221 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 PSG8Q9UQ74 426 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 TIMM8BQ9Y5J9 83 aaPredicted RBP2.01□□□□□ -2.09
MCF2-208ENST00000519895 PKD1P98161 4303 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 IGHV3-21A0A0B4J1V1 117 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 TRBV6-4A0A1B0GX49 114 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 C19orf71A6NCJ1 209 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 A8MWV9 139 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 H7C423 109 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 M0R2P5 195 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 ARPC5O15511 151 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 GCGP01275 180 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 ZNF688P0C7X2 276 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 BCL2P10415 239 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 FGF8P55075 233 aaPredicted RBP2.01□□□□□ -2.09
MCF2-208ENST00000519895 CLINT1Q14677 625 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 COX19Q49B96 90 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 RASL11AQ6T310 242 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 OR11H2Q8NH07 326 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 TMEM18Q96B42 140 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 APLNQ9ULZ1 77 aa2.01□□□□□ -2.09
MCF2-208ENST00000519895 AGRNO00468 2067 aa2□□□□□ -2.09
MCF2-208ENST00000519895 IGHV3-16A0A0C4DH30 117 aa2□□□□□ -2.09
MCF2-208ENST00000519895 IGHV4-28A0A0C4DH34 117 aa2□□□□□ -2.09
MCF2-208ENST00000519895 PGPA6NDG6 321 aa2□□□□□ -2.09
MCF2-208ENST00000519895 LINC01549A6NIU2 74 aa2□□□□□ -2.09
MCF2-208ENST00000519895 SLC17A3O00476 420 aa2□□□□□ -2.09
MCF2-208ENST00000519895 P0DMU3 169 aa2□□□□□ -2.09
MCF2-208ENST00000519895 FAM231AP0DMU4 169 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms