RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 SIX6O95475 246 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 CPSF4O95639 269 aaKnown RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 SOD1P00441 154 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 IGF2P01344 180 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 APOA2P02652 100 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TTRP02766 147 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 DBIP07108 87 aaKnown RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR5G3P0C626 314 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 LINC00032P0C843 101 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 CGB3P0DN86 165 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 CGB7P0DN87 165 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 GZMBP10144 247 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 CPMP14384 443 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 FABP4P15090 132 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 ADCYAP1P18509 176 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 RPS4Y1P22090 263 aaKnown RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 HIST1H1TP22492 207 aaPredicted RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 ATP6V0CP27449 155 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 GABRA3P34903 492 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 GLRXP35754 106 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 GUCA1AP43080 201 aaPredicted RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 POLR2HP52434 150 aaKnown RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 ZNF140P52738 457 aaPredicted RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TCTAP57738 103 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TAS2R20P59543 309 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 LCN6P62502 163 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 RPS25P62851 125 aaKnown RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 GNG5P63218 68 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 HOXC5Q00444 222 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 BSPH1Q075Z2 132 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 SURF2Q15527 256 aaPredicted RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OCIAD2Q56VL3 154 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 NCMAPQ5T1S8 102 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 FAM78BQ5VT40 261 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 AMMECR1LQ6DCA0 310 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR2T2Q6IF00 324 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 ANKRD29Q8N6D5 301 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR4S1Q8NGB4 309 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR8B12Q8NGG6 310 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR51T1Q8NGJ9 327 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR5D16Q8NGK9 328 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR5H2Q8NGV7 314 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR13C6PQ8NH95 151 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 CMTM2Q8TAZ6 248 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 STAG3L4Q8TBR4 150 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 THEM6Q8WUY1 208 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 PSMF1Q92530 271 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 SLAMF6Q96DU3 332 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 S100A16Q96FQ6 103 aaKnown RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 MCEEQ96PE7 176 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 AQP10Q96PS8 301 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TSPAN32Q96QS1 320 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TRIB3Q96RU7 358 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TP53RKQ96S44 253 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 HIST1H2BLQ99880 126 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 VAMP8Q9BV40 100 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TMEM147Q9BVK8 224 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 SNHG12Q9BXW3 62 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 NMES1Q9C002 83 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR2J1Q9GZK6 312 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 FXYD6Q9H0Q3 95 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TMEM222Q9H0R3 208 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 GTSF1LQ9H1H1 148 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 SLC35B3Q9H1N7 401 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 OR51I2Q9H344 312 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 CST9LQ9H4G1 147 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 HES4Q9HCC6 221 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 SLC23A2Q9UGH3 650 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 NAT8Q9UHE5 227 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TAC3Q9UHF0 121 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 RABAC1Q9UI14 185 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TRAPPC2LQ9UL33 140 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 MRPS16Q9Y3D3 137 aaKnown RBP1.28□□□□□ -2.2
PABPC1-209ENST00000519100 DNAJC15Q9Y5T4 150 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 TMEM56-RWDD3S4R434 201 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 MYH11P35749 1972 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 SCN3AQ9NY46 2000 aa1.28□□□□□ -2.2
PABPC1-209ENST00000519100 CHD5Q8TDI0 1954 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 DSPPQ9NZW4 1301 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 IGLV10-54A0A075B6I4 117 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 IGHV1-45A0A0A0MS14 117 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 TRAV8-1A0A0A6YYK1 113 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 A0A0B4J2C4 111 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 SPTY2D1-AS1A0A0U1RR47 76 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 IGSF23A1L1A6 192 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 C7orf77A4D0Y5 90 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 MAP1LC3B2A6NCE7 125 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 KNCNA6PVL3 124 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 A8MT66 165 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 A8MWP4 228 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 DEFB108AA8MXU0 73 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 E7EQ34 232 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 E7EQL1 145 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 C17orf112F2Z3M2 114 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 HIST1H2BKO60814 126 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 LTAP01374 205 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 HLA-DRB1P01911 266 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 PMP2P02689 132 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 C1QCP02747 245 aa1.27□□□□□ -2.21
PABPC1-209ENST00000519100 MT-ND6P03923 174 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms