RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 GCSHP23434 173 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 CFHR3Q02985 330 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 C10orf105Q8TEF2 133 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 SMPXQ9UHP9 88 aa6.36□□□□□ -1.39
CTNNA1-210ENST00000518825 AGRNO00468 2067 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 BRI3O95415 125 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 TM2D2Q9BX73 214 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 SUMO2P61956 95 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 NEXN-AS1Q8NBZ9 246 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 MYOZ3Q8TDC0 251 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 TOMM6Q96B49 74 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 RHPN1-AS1Q9BWJ2 59 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 KIF25-AS1Q9Y6Z4 181 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 CENPEQ02224 2701 aa6.35□□□□□ -1.39
CTNNA1-210ENST00000518825 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 A6NJY4 79 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 OVOL1O14753 267 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 C10orf99Q6UWK7 81 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 OR10J6PQ8NGY7 276 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 JPT2Q9H910 190 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 CSPG4Q6UVK1 2322 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 HLA-DRB4P13762 266 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 NEGR1Q7Z3B1 354 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 CEND1Q8N111 149 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 DEFB104AQ8WTQ1 72 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 HLA-DRB4X5D2U9 266 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 DOPEY1Q5JWR5 2465 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 PF4V1P10720 104 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 SCGB2A2Q13296 93 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 POM121L12Q8N7R1 296 aa6.34□□□□□ -1.39
CTNNA1-210ENST00000518825 TRAV12-1A0A0B4J245 112 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 TSHBP01222 138 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 RPL11P62913 178 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.33□□□□□ -1.41e-6■■■□□ 18.2
CTNNA1-210ENST00000518825 DCANP1Q8TF63 244 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 USMG5Q96IX5 58 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 DPH3P1Q9H4G8 78 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 KLLNB2CW77 178 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 NXPH4O95158 308 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 CRYGDP07320 174 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 SMIM13P0DJ93 91 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 ASIPP42127 132 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 SAMD5Q5TGI4 173 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 BAALCQ8WXS3 180 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 C20orf78Q9BR46 151 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 F8VRH5 84 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 GTF2H5Q6ZYL4 71 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 PIMREGQ9BSJ6 248 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 SPCS1Q9Y6A9 102 aa6.33□□□□□ -1.4
CTNNA1-210ENST00000518825 POLQO75417 2590 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 H3BUA1 57 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 H7C1H1 209 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 PLNP26678 52 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 PSMG4Q5JS54 123 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 CCL19Q99731 98 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 NHP2Q9NX24 153 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 USP9YO00507 2555 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 MGPP08493 103 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 S100A4P26447 101 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 C2orf66Q6UXQ4 117 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 NRGNQ92686 78 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 SCGB3A1Q96QR1 104 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 MED14OSP0DP75 135 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 AP1S3Q96PC3 154 aa6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 DAZ1Q9NQZ3 744 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-210ENST00000518825 PRSS29PA6NIE9 313 aa6.31□□□□□ -1.4
CTNNA1-210ENST00000518825 DUSP14O95147 198 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-210ENST00000518825 ORMDL2Q53FV1 153 aa6.31□□□□□ -1.4
CTNNA1-210ENST00000518825 G3V4G9 280 aa6.31□□□□□ -1.4
CTNNA1-210ENST00000518825 MSMBP08118 114 aa6.31□□□□□ -1.4
CTNNA1-210ENST00000518825 SLC25A16P16260 332 aa6.31□□□□□ -1.4
CTNNA1-210ENST00000518825 CACNA1AO00555 2505 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 E9PLD3 99 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 PSMB8P28062 276 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 MYO18BQ8IUG5 2567 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 IGLV4-69A0A075B6H9 119 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 TRBV7-9A0A0J9YWB2 115 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 IGLL5B9A064 214 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 COX6B1P14854 86 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 IGHV4OR15-8A0A075B7B6 117 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 A0A087WW49 117 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 LGALS1P09382 135 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 FABP2P12104 132 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 POLR2KP53803 58 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 ATP5J2P56134 94 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 C12orf74Q32Q52 190 aa6.3□□□□□ -1.4
CTNNA1-210ENST00000518825 A0A087WWL8 130 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 MYMXA0A1B0GTQ4 84 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 K7ERU9 68 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 SUMO4Q6EEV6 95 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 MORN3Q6PF18 240 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 TRAV12-3A0A0B4J271 114 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 IGHV4-59P01825 116 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms