RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 TMEM210A6NLX4 147 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 M0QZ92 97 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 M0R2P5 195 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 HMGB3O15347 200 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 BCE1O60756 84 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR2H2O95918 312 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 IFNA14P01570 189 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 IFNGP01579 166 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 CALB1P05937 261 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 CRHP06850 196 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 SERPINA6P08185 405 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 CXCL1P09341 107 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 CCL2P13500 99 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 RPL35P42766 123 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 GTF2A1P52655 376 aaPredicted RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 SKP1P63208 163 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 HIST1H3AP68431 136 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 BASP1P80723 227 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 MRPS36P82909 103 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 SSBP1Q04837 148 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 ITGB3BPQ13352 177 aaPredicted RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 FKBP1CQ5VVH2 108 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 LINC00269Q8N2A0 174 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 CLEC2BQ92478 149 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 AP3S1Q92572 193 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 MCEEQ96PE7 176 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 C7orf50Q9BRJ6 194 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRIM4Q9C037 500 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 C19orf12Q9NSK7 152 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 UQCC1Q9NVA1 299 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 MED11Q9P086 117 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 AKAP9Q99996 3911 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 TEP1Q99973 2627 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 PIK3C2GO75747 1445 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 UHRF1BP1Q6BDS2 1440 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 ANKRD50Q9ULJ7 1429 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 SNAPC4Q5SXM2 1469 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 ARHGEF12Q9NZN5 1544 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 ALKQ9UM73 1620 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 ANKRD36CQ5JPF3 1778 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 SONP18583 2426 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 RYR2Q92736 4967 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 LAMA3Q16787 3333 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 KIAA1109Q2LD37 5005 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRAV4A0A0B4J268 109 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 A0A0G2JMZ2 1700 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 LOC100506127A0A0U1RQW1 187 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 FAM236DA0A1B0GTK5 79 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 MAP1LC3B2A6NCE7 125 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRPC5OSA6NMA1 111 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 G3V318 75 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 H0YJX3 145 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 H3BNG1 76 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 PDE6DO43924 150 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 NDUFS6O75380 124 aaKnown RBP-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 DCTN3O75935 186 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 CST7O76096 145 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 CNIH1O95406 144 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 APOA2P02652 100 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 TFF1P04155 84 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 SAA1P0DJI8 122 aaPredicted RBP-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 FAM236CP0DP71 79 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 COX8AP10176 69 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 TPT1P13693 172 aaKnown RBP-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 ADCYAP1P18509 176 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 OMPP47874 163 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 LSM3P62310 102 aaKnown RBP-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 ARF6P62330 175 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 MLLT11Q13015 90 aaPredicted RBP-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 PMS2P3Q13401 168 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 POU6F1Q14863 301 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 MSMO1Q15800 293 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 CCSMST1Q4G0I0 132 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 CFAP126Q5VTH2 177 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 SFXN4Q6P4A7 337 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 CD109Q6YHK3 1445 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 PKD1L2Q7Z442 2459 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 PKD1L3Q7Z443 1732 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 TIAM2Q8IVF5 1701 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 C20orf197Q8N268 126 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 COX7B2Q8TF08 81 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 BORCS7Q96B45 105 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 C8orf76Q96K31 380 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 TEX37Q96LM6 180 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 SDF2Q99470 211 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 LXNQ9BS40 222 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR2J1Q9GZK6 312 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 CHMP4BQ9H444 224 aaKnown RBP-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 LINC00472Q9H8W2 130 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRAPPC8Q9Y2L5 1435 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 NUBP2Q9Y5Y2 271 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 RNF213Q63HN8 5207 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 ZZEF1O43149 2961 aa-0.51□□□□□ -2.49
RNU4-49P-201ENST00000516080 RIF1Q5UIP0 2472 aaKnown RBP-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 PKHD1L1Q86WI1 4243 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 MON2Q7Z3U7 1717 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 RAPGEF6Q8TEU7 1601 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 SRCAPQ6ZRS2 3230 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 ADAMTS12P58397 1594 aa-0.52□□□□□ -2.49
RNU4-49P-201ENST00000516080 HMGXB3Q12766 1538 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms