RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 A0A1W2PRE2 83 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 K7EQM0 130 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 GCGP01275 180 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.065e-16■□□□□ 9.4
VEGFA-216ENST00000512683 PPT1P50897 306 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 LAGE3Q14657 143 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 LINC00479Q96M42 142 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 CYTL1Q9NRR1 136 aa8.43□□□□□ -1.06
VEGFA-216ENST00000512683 CTXND1A0A1B0GTU2 59 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 A0A1B0GVG6 124 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 FBLL1A6NHQ2 334 aaKnown RBP8.42□□□□□ -1.06
VEGFA-216ENST00000512683 TAAR5O14804 337 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 RHOHQ15669 191 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 LELP1Q5T871 98 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 DPPA3Q6W0C5 159 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 Q6ZSN1 163 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 PRNTQ86SH4 94 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 Q8N814 137 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 TMEM75Q8N9X5 138 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 NHLRC2Q8NBF2 726 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 C9orf85Q96MD7 179 aa8.42□□□□□ -1.06
VEGFA-216ENST00000512683 TRAV34A0A0B4J273 112 aa8.41□□□□□ -1.06
VEGFA-216ENST00000512683 RS1O15537 224 aa8.41□□□□□ -1.06
VEGFA-216ENST00000512683 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-216ENST00000512683 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
VEGFA-216ENST00000512683 SMUG1Q53HV7 270 aa8.41□□□□□ -1.06
VEGFA-216ENST00000512683 PIK3CD-AS1Q5SR53 167 aa8.41□□□□□ -1.06
VEGFA-216ENST00000512683 SLC25A29Q8N8R3 303 aa8.41□□□□□ -1.06
VEGFA-216ENST00000512683 GTSF1LQ9H1H1 148 aa8.41□□□□□ -1.06
VEGFA-216ENST00000512683 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
VEGFA-216ENST00000512683 SRRM2Q9UQ35 2752 aaKnown RBP8.4□□□□□ -1.06
VEGFA-216ENST00000512683 PGPEP1LA6NFU8 196 aa8.4□□□□□ -1.06
VEGFA-216ENST00000512683 MGST1P10620 155 aaKnown RBP8.4□□□□□ -1.06
VEGFA-216ENST00000512683 RNASE3P12724 160 aaKnown RBP8.4□□□□□ -1.06
VEGFA-216ENST00000512683 FGF8P55075 233 aaPredicted RBP8.4□□□□□ -1.06
VEGFA-216ENST00000512683 UBE2G2P60604 165 aa8.4□□□□□ -1.06
VEGFA-216ENST00000512683 OR10J3Q5JRS4 329 aa8.4□□□□□ -1.06
VEGFA-216ENST00000512683 SAPCD1Q5SSQ6 148 aa8.4□□□□□ -1.06
VEGFA-216ENST00000512683 CFAP126Q5VTH2 177 aa8.4□□□□□ -1.06
VEGFA-216ENST00000512683 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 TRAV8-3A0A0A6YYJ7 113 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 FAM74A7A6NL05 159 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 SMLR1H3BR10 107 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 ARPC5O15511 151 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 TOR2AQ5JU69 321 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 COX11Q9Y6N1 276 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
VEGFA-216ENST00000512683 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
VEGFA-216ENST00000512683 PEX7O00628 323 aa8.38□□□□□ -1.07
VEGFA-216ENST00000512683 IFNA7P01567 189 aa8.38□□□□□ -1.07
VEGFA-216ENST00000512683 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
VEGFA-216ENST00000512683 ZFP69Q49AA0 526 aa8.38□□□□□ -1.07
VEGFA-216ENST00000512683 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
VEGFA-216ENST00000512683 AKR1C8PQ5T2L2 129 aa8.38□□□□□ -1.07
VEGFA-216ENST00000512683 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
VEGFA-216ENST00000512683 A0A087WWC5 75 aa8.37□□□□□ -1.07
VEGFA-216ENST00000512683 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
VEGFA-216ENST00000512683 MAP1LC3B2A6NCE7 125 aa8.37□□□□□ -1.07
VEGFA-216ENST00000512683 FABP5P3A8MUU1 101 aa8.37□□□□□ -1.07
VEGFA-216ENST00000512683 SEC11BP0C7V7 166 aa8.37□□□□□ -1.07
VEGFA-216ENST00000512683 CRIP1P50238 77 aa8.37□□□□□ -1.07
VEGFA-216ENST00000512683 Q86TA4 180 aa8.37□□□□□ -1.07
VEGFA-216ENST00000512683 NKX6-2Q9C056 277 aaPredicted RBP8.37□□□□□ -1.07
VEGFA-216ENST00000512683 MAP1LC3BQ9GZQ8 125 aa8.37□□□□□ -1.07
VEGFA-216ENST00000512683 A8MWV9 139 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 J3QL48 77 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 FHITP49789 147 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 Q6ZSA8 131 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 COX8CQ7Z4L0 72 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 KCNRGQ8N5I3 272 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 OR11H4Q8NGC9 324 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 HIST1H2BAQ96A08 127 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
VEGFA-216ENST00000512683 hCG_2014768A0A024R1R8 64 aa8.35□□□□□ -1.07
VEGFA-216ENST00000512683 ZNF345Q14585 488 aa8.35□□□□□ -1.07
VEGFA-216ENST00000512683 DEFB104AQ8WTQ1 72 aa8.35□□□□□ -1.07
VEGFA-216ENST00000512683 Q9HAA7 133 aa8.35□□□□□ -1.07
VEGFA-216ENST00000512683 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
VEGFA-216ENST00000512683 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 DNLZQ5SXM8 178 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 UFSP1Q6NVU6 142 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 RMI2Q96E14 147 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 PARLQ9H300 379 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 JPT2Q9H910 190 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 IL36BQ9NZH7 164 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 Q9UF83 564 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 ZFP30Q9Y2G7 519 aa8.34□□□□□ -1.07
VEGFA-216ENST00000512683 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
VEGFA-216ENST00000512683 HMSDA8MTL9 139 aa8.33□□□□□ -1.08
VEGFA-216ENST00000512683 B4DEV8 164 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms