RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, human

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42SE2-210	ENST00000506929	BET1L	Q9NYM9	111 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	CRIPT	Q9P021	101 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	METTL1	Q9UBP6	276 aa	Known RBP	0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HS3ST2	Q9Y278	367 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	DNAJC15	Q9Y5T4	150 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	LMTK2	Q8IWU2	1503 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	RGPD3	A6NKT7	1758 aa	Predicted RBP	0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	RGPD4	Q7Z3J3	1758 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	RGPD5	Q99666	1765 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	DSPP	Q9NZW4	1301 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SETBP1	Q9Y6X0	1596 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	BTAF1	O14981	1849 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	NUP98	P52948	1817 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	MAST4	O15021	2626 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	MYO7B	Q6PIF6	2116 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	ZGRF1	Q86YA3	2104 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	CCDC180	Q9P1Z9	1646 aa		0.31	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	PPRC1	Q5VV67	1664 aa	Known RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	ITSN2	Q9NZM3	1697 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	ARHGAP31	Q2M1Z3	1444 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	C9orf84	Q5VXU9	1444 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	FMN1	Q68DA7	1419 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	CASKIN1	Q8WXD9	1431 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	CHD1	O14646	1710 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	ARHGEF28	Q8N1W1	1705 aa	Known RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	MYO5C	Q9NQX4	1742 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	UHRF1BP1L	A0JNW5	1464 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	MED14	O60244	1454 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	GOLGA3	Q08378	1498 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	CAMSAP2	Q08AD1	1489 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	ARHGAP35	Q9NRY4	1499 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	NRXN1	Q9ULB1	1477 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SHANK2	Q9UPX8	1470 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	PPL	O60437	1756 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	EPRS	P07814	1512 aa	Known RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	ZFYVE16	Q7Z3T8	1539 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	TRBV20OR9-2	A0A075B6H5	130 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	TRAV12-2	A0A075B6T6	113 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	TRAV13-1	A0A0B4J241	112 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929		A0A0G2JND7	137 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	IGLC7	A0M8Q6	106 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	FAM223B	A6NKX1	122 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929		E7EUB6	86 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929		H3BMG7	143 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929		H3BUT2	72 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929		K7EP34	96 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SSSCA1	O60232	199 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HIST1H2BK	O60814	126 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	TIMM17B	O60830	172 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	NDUFB6	O95139	128 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	IGKC	P01834	107 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HIST1H2BJ	P06899	126 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SMIM10L2A	P0DMW4	78 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SMIM10L2B	P0DMW5	78 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	BCL2	P10415	239 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	PIP	P12273	146 aa	Predicted RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HLA-DRB4	P13762	266 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	MYL12A	P19105	171 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	PPIB	P23284	216 aa	Known RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	CBLN1	P23435	193 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HIST1H2BO	P23527	126 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HIST1H2BB	P33778	126 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SRP14	P37108	136 aa	Known RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	PI4KA	P42356	2102 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	DYNLT3	P51808	116 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	EFNA4	P52798	201 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	FXYD2	P54710	66 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HIST1H2BD	P58876	126 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	MAGOH	P61326	146 aa	Known RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	NPC2	P61916	151 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HIST1H2BC	P62807	126 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	BLCAP	P62952	87 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HBB	P68871	147 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HAMP	P81172	84 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	MYL5	Q02045	173 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SPA17	Q15506	151 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HIST2H2BE	Q16778	126 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	RTL8B	Q17RB0	113 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	ETDB	Q3ZM63	59 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	LINC01554	Q52M75	96 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SPATA45	Q537H7	98 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SPRN	Q5BIV9	151 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	NMS	Q5H8A3	153 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	COL5A1-AS1	Q5SY13	56 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	GDF5OS	Q5U4N7	250 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	C1orf140	Q5VVS0	124 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929		Q6AWC8	147 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	RPL7L1	Q6DKI1	246 aa	Known RBP	0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	OR2T2	Q6IF00	324 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	C22orf39	Q6P5X5	142 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	CSAG1	Q6PB30	78 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929		Q6Q795	121 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	IZUMO2	Q6UXV1	221 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	PATE2	Q6UY27	113 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	GTF2H5	Q6ZYL4	71 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	SLC25A26	Q70HW3	274 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	AAED1	Q7RTV5	226 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	C1orf158	Q8N1D5	194 aa		0.3	□□□□□ -2.36
CDC42SE2-210	ENST00000506929	C10orf111	Q8N326	155 aa		0.3	□□□□□ -2.36

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