RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 KCNRGQ8N5I3 272 aa11.31□□□□□ -0.6
PDLIM7-215ENST00000506161 FBLL1A6NHQ2 334 aaKnown RBP11.3□□□□□ -0.6
PDLIM7-215ENST00000506161 SAPCD1Q5SSQ6 148 aa11.29□□□□□ -0.6
PDLIM7-215ENST00000506161 Q8N3U1 123 aa11.29□□□□□ -0.6
PDLIM7-215ENST00000506161 PCNPQ8WW12 178 aaKnown RBP11.29□□□□□ -0.6
PDLIM7-215ENST00000506161 SAMD10Q9BYL1 202 aa11.29□□□□□ -0.6
PDLIM7-215ENST00000506161 A0A1B0GV50 99 aa11.28□□□□□ -0.6
PDLIM7-215ENST00000506161 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
PDLIM7-215ENST00000506161 ZFP69Q49AA0 526 aa11.28□□□□□ -0.6
PDLIM7-215ENST00000506161 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
PDLIM7-215ENST00000506161 NHLRC2Q8NBF2 726 aa11.28□□□□□ -0.6
PDLIM7-215ENST00000506161 PTH2Q96A98 100 aa11.28□□□□□ -0.6
PDLIM7-215ENST00000506161 PARLQ9H300 379 aa11.28□□□□□ -0.6
PDLIM7-215ENST00000506161 LY96Q9Y6Y9 160 aa11.28□□□□□ -0.6
PDLIM7-215ENST00000506161 M0R036 132 aa11.27□□□□□ -0.61
PDLIM7-215ENST00000506161 SH2D1AO60880 128 aa11.27□□□□□ -0.61
PDLIM7-215ENST00000506161 ZNF345Q14585 488 aa11.27□□□□□ -0.61
PDLIM7-215ENST00000506161 COX8CQ7Z4L0 72 aa11.27□□□□□ -0.61
PDLIM7-215ENST00000506161 TXNDC17Q9BRA2 123 aa11.27□□□□□ -0.61
PDLIM7-215ENST00000506161 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
PDLIM7-215ENST00000506161 KRBOX1C9JBD0 128 aa11.26□□□□□ -0.61
PDLIM7-215ENST00000506161 H3BVH4 76 aa11.26□□□□□ -0.61
PDLIM7-215ENST00000506161 PAGE4O60829 102 aa11.26□□□□□ -0.61
PDLIM7-215ENST00000506161 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
PDLIM7-215ENST00000506161 DMRTA1Q5VZB9 504 aa11.26□□□□□ -0.61
PDLIM7-215ENST00000506161 HIST1H2BAQ96A08 127 aa11.26□□□□□ -0.61
PDLIM7-215ENST00000506161 TRBV6-4A0A1B0GX49 114 aa11.25□□□□□ -0.61
PDLIM7-215ENST00000506161 C14orf178Q8N769 122 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-215ENST00000506161 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
PDLIM7-215ENST00000506161 MBD3L1Q8WWY6 194 aa11.25□□□□□ -0.61
PDLIM7-215ENST00000506161 MSRB1Q9NZV6 116 aa11.25□□□□□ -0.61
PDLIM7-215ENST00000506161 DMBT1Q9UGM3 2413 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 A0A087WTM6 91 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 TMSB15BA0A087X1C1 80 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 HMSDA8MTL9 139 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 B4DEV8 164 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 BCL2L11O43521 198 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 LTAP01374 205 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 SEC11BP0C7V7 166 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 ASIPP42127 132 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 TIRAPP58753 221 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 RHOHQ15669 191 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 DNLZQ5SXM8 178 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 CST9LP1Q5W188 147 aa11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 ZNF471Q9BX82 626 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-215ENST00000506161 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
PDLIM7-215ENST00000506161 CRYGDP07320 174 aa11.23□□□□□ -0.61
PDLIM7-215ENST00000506161 PPT1P50897 306 aa11.23□□□□□ -0.61
PDLIM7-215ENST00000506161 RPL19P84098 196 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-215ENST00000506161 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
PDLIM7-215ENST00000506161 FMC1Q96HJ9 113 aa11.23□□□□□ -0.61
PDLIM7-215ENST00000506161 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
PDLIM7-215ENST00000506161 IGHV3-38A0A0C4DH36 116 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 TRBV6-1A0A0K0K1D8 114 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 S100A4P26447 101 aaKnown RBP11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 CCL20P78556 96 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 GAGE1Q13065 139 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 GAGE4Q13068 117 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 GAGE5Q13069 117 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 LGALSLQ3ZCW2 172 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 PRADC1Q9BSG0 188 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 ZFP30Q9Y2G7 519 aa11.22□□□□□ -0.61
PDLIM7-215ENST00000506161 IGHV3-30P01768 117 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 IGHV3-33P01772 117 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 EVI2AP22794 236 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 AKR1C3P42330 323 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 UBE2G1P62253 170 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 LINC01559Q495D7 138 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 TMUB2Q71RG4 321 aa11.21□□□□□ -0.61
PDLIM7-215ENST00000506161 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
PDLIM7-215ENST00000506161 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
PDLIM7-215ENST00000506161 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
PDLIM7-215ENST00000506161 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
PDLIM7-215ENST00000506161 ATP6V0E2Q8NHE4 81 aa11.2□□□□□ -0.62
PDLIM7-215ENST00000506161 A0A087WWL8 130 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 A0A0D9SG52 128 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 LRCOL1A6NCL2 159 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 A8MWV9 139 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 CIDEAO60543 219 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 LELP1Q5T871 98 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 ZFP2Q6ZN57 461 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 SH2D6Q7Z4S9 175 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 STOML3Q8TAV4 291 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 MLST8Q9BVC4 326 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
PDLIM7-215ENST00000506161 TRAV9-2A0A087WT02 112 aa11.18□□□□□ -0.62
PDLIM7-215ENST00000506161 KANTRA0A1W2PQU2 76 aa11.18□□□□□ -0.62
PDLIM7-215ENST00000506161 IBA57-AS1B1ANH7 110 aa11.18□□□□□ -0.62
PDLIM7-215ENST00000506161 XGP55808 180 aa11.18□□□□□ -0.62
PDLIM7-215ENST00000506161 WFDC2Q14508 124 aa11.18□□□□□ -0.62
PDLIM7-215ENST00000506161 PIK3CD-AS1Q5SR53 167 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms