RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 SMIM21Q3B7S5 101 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 C6orf52Q5T4I8 152 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 SPATA8Q6RVD6 105 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 SLC25A26Q70HW3 274 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 ATP6V0E2Q8NHE4 81 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 DYNLRB2Q8TF09 96 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 PSMG3Q9BT73 122 aaPredicted RBP0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 PAIP2BQ9ULR5 123 aaKnown RBP0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 AFDNP55196 1824 aaKnown RBP0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 CEP152O94986 1710 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 UBR4Q5T4S7 5183 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 PTPRGP23470 1445 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 ARHGAP31Q2M1Z3 1444 aa0.38□□□□□ -2.35
UBE2D3-218ENST00000505009 CDK5RAP2Q96SN8 1893 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 KIDINS220Q9ULH0 1771 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 RREB1Q92766 1687 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 SPAG17Q6Q759 2223 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 BICRAQ9NZM4 1560 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 TRBV20-1A0A075B6N2 111 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 TRAV12-2A0A075B6T6 113 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 LOC101927531A0A1B0GV80 90 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 TCRBV3S1A0A5B6 114 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 A6NIN4 97 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 MCRIP1C9JLW8 97 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 ZNF670-ZNF695F2Z2N8 137 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 CCDC179H3BU77 68 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 M0R2P5 195 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 NCR2O95944 276 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 HIST1H1AQ02539 215 aaPredicted RBP0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 FXYD3Q14802 87 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 RPL7L1Q6DKI1 246 aaKnown RBP0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 C10orf99Q6UWK7 81 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 ATP11AUNQ6ZP68 121 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 CYP2G1PQ6ZSU1 146 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 NDUFA11Q86Y39 141 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 TSTD1Q8NFU3 115 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 TCEAL4Q96EI5 215 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 TMEM141Q96I45 108 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 DSCR8Q96T75 97 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 BET1LQ9NYM9 111 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 DNAJC15Q9Y5T4 150 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 LRP5O75197 1615 aa0.37□□□□□ -2.35
UBE2D3-218ENST00000505009 MUC2Q02817 5179 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 MYH13Q9UKX3 1938 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 ZCCHC6Q5VYS8 1495 aaKnown RBP0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 PIGBOS1A0A0B4J2F0 54 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 F2Z2F3 143 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 K7EIL1 84 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 TFF1P04155 84 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 MPC1LP0DKB6 136 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 PIPP12273 146 aaPredicted RBP0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 RRAS2P62070 204 aaPredicted RBP0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 KLKP1Q107X0 134 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 ZNF56Q15929 161 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 FAM74A4Q5TZK3 123 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 SPANXN1Q5VSR9 72 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 C5orf56Q8N8D9 126 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 VSTM2AQ8TAG5 236 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 COPS9Q8WXC6 57 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 PLAC4Q8WY50 150 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 LINC00208Q96KT6 92 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 TSC22D3Q99576 134 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 TPT1P8Q9HAU6 139 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 TMEM14BQ9NUH8 114 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 ZDBF2Q9HCK1 2354 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 DLEC1Q9Y238 1755 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 BLMP54132 1417 aaPredicted RBP0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 KMT2DO14686 5537 aa0.36□□□□□ -2.35
UBE2D3-218ENST00000505009 RBAKDNA6NC62 111 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 M0R129 80 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 PITX3O75364 302 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 SNCGO76070 127 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 IFNA17P01571 189 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 TSPAN19P0C672 248 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 IGLC6P0CF74 106 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 GUCA1AP43080 201 aaPredicted RBP0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 ARPC4P59998 168 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 COPZ1P61923 177 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 S100A12P80511 92 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 SPCS2Q15005 226 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 CCDC58Q4VC31 144 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 GLYATL3Q5SZD4 288 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 SCIMPQ6UWF3 145 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 DEFB132Q7Z7B7 95 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 KCNRGQ8N5I3 272 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 SPTSSAQ969W0 71 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 FAM107BQ9H098 131 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 CCDC167Q9P0B6 97 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 LSM2Q9Y333 95 aaKnown RBP0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 PLXNA2O75051 1894 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 ERCC6Q03468 1493 aa0.35□□□□□ -2.35
UBE2D3-218ENST00000505009 LOC285556D6RIA3 1793 aa0.34□□□□□ -2.35
UBE2D3-218ENST00000505009 KNTC1P50748 2209 aa0.34□□□□□ -2.35
UBE2D3-218ENST00000505009 ZNF142P52746 1687 aaPredicted RBP0.34□□□□□ -2.35
UBE2D3-218ENST00000505009 SPEF2Q9C093 1822 aa0.34□□□□□ -2.35
UBE2D3-218ENST00000505009 KIF13AQ9H1H9 1805 aa0.34□□□□□ -2.35
UBE2D3-218ENST00000505009 NBDYA0A0U1RRE5 68 aa0.34□□□□□ -2.36
UBE2D3-218ENST00000505009 FAM236AA0A1B0GUQ0 79 aa0.34□□□□□ -2.36
UBE2D3-218ENST00000505009 FAM236BA0A1B0GV22 79 aa0.34□□□□□ -2.36
UBE2D3-218ENST00000505009 FAM92AA1XBS5 289 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms