RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 LINC01587Q99440 93 aa3.5□□□□□ -1.85
CMSS1-209ENST00000497345 TUBA4BQ9H853 241 aa3.5□□□□□ -1.85
CMSS1-209ENST00000497345 TMEM242Q9NWH2 141 aa3.5□□□□□ -1.85
CMSS1-209ENST00000497345 NAT8BQ9UHF3 227 aa3.5□□□□□ -1.85
CMSS1-209ENST00000497345 TP53TG3Q9ULZ0 132 aa3.5□□□□□ -1.85
CMSS1-209ENST00000497345 ZNF256Q9Y2P7 627 aaPredicted RBP3.5□□□□□ -1.85
CMSS1-209ENST00000497345 TRAPPC1Q9Y5R8 145 aa3.5□□□□□ -1.85
CMSS1-209ENST00000497345 NIPBLQ6KC79 2804 aaeCLIP3.49□□□□□ -1.85
CMSS1-209ENST00000497345 CUBNO60494 3623 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 TENM1Q9UKZ4 2725 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 TRAV2A0A0B4J234 112 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 TRAV21A0A0B4J279 112 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 SNURFLB1AK76 121 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 M0R381 172 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 ARMS2P0C7Q2 107 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 HLA-DRB4P13762 266 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 S100A4P26447 101 aaKnown RBP3.49□□□□□ -1.85
CMSS1-209ENST00000497345 TSPOP30536 169 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 FOXA3P55318 350 aaPredicted RBP3.49□□□□□ -1.85
CMSS1-209ENST00000497345 RPS20P60866 119 aaKnown RBP3.49□□□□□ -1.85
CMSS1-209ENST00000497345 TWIST1Q15672 202 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 FER1L6-AS1Q8NA97 138 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 PRSS3P2Q8NHM4 247 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 SMIM12Q96EX1 92 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 TMEM208Q9BTX3 173 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 SIGLEC8Q9NYZ4 499 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 HLA-DRB4X5D2U9 266 aa3.49□□□□□ -1.85
CMSS1-209ENST00000497345 TRBV24-1A0A075B6N3 115 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 XKRY2A2RUG3 117 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 CBY3A6NI87 242 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 APCSP02743 223 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 PRB2P02812 416 aaPredicted RBP3.48□□□□□ -1.85
CMSS1-209ENST00000497345 RBMY1A1P0DJD3 496 aaKnown RBP3.48□□□□□ -1.85
CMSS1-209ENST00000497345 RBMY1CP0DJD4 496 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 ASIPP42127 132 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 CDKN1BP46527 198 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 RAB5BP61020 215 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 RIGQ13278 110 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 RBMY1FQ15415 496 aaKnown RBP3.48□□□□□ -1.85
CMSS1-209ENST00000497345 FAM159AQ6UWV7 190 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 AMTNQ6UX39 209 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 GTSCR1Q86UQ5 136 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 OR2K2Q8NGT1 345 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 OR10AG1Q8NH19 301 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 FAM19A4Q96LR4 140 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 PYGO2Q9BRQ0 406 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 SRD5A3Q9H8P0 318 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 MSRB1Q9NZV6 116 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 MDFICQ9P1T7 246 aa3.48□□□□□ -1.85
CMSS1-209ENST00000497345 IGHV1OR15-1A0A075B7D0 117 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 A0A1B0GUT8 65 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 KLLNB2CW77 178 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 G3V4G9 280 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 SMKR1H3BMG3 65 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 CRXO43186 299 aaPredicted RBP3.47□□□□□ -1.85
CMSS1-209ENST00000497345 INSP01308 110 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 TYMSP04818 313 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 MGPP08493 103 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 TRGC1P0CF51 173 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 CRISP2P16562 243 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 NTF3P20783 257 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 EMP1P54849 157 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
CMSS1-209ENST00000497345 HBBP68871 147 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 IQCJQ1A5X6 159 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 PDZD11Q5EBL8 140 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 SPANXN1Q5VSR9 72 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 TMEM136Q6ZRR5 245 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 TRPT1Q86TN4 253 aaKnown RBP3.47□□□□□ -1.85
CMSS1-209ENST00000497345 MCRIP2Q9BUT9 160 aaKnown RBP3.47□□□□□ -1.85
CMSS1-209ENST00000497345 LENEPQ9Y5L5 61 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 NOTCH3Q9UM47 2321 aa3.47□□□□□ -1.85
CMSS1-209ENST00000497345 STAB1Q9NY15 2570 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 TRAV9-1A0A075B6T8 112 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 IGHV3-73A0A0B4J1V6 119 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 LOC389332A0A1B0GUA5 103 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 F2Z2F3 143 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 ZNF324O75467 553 aaPredicted RBP3.46□□□□□ -1.86
CMSS1-209ENST00000497345 NCR2O95944 276 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 S100A6P06703 90 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 IGLC6P0CF74 106 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 AZU1P20160 251 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 SRIP30626 198 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 INSL3P51460 131 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 NUTF2P61970 127 aaKnown RBP3.46□□□□□ -1.86
CMSS1-209ENST00000497345 SNRPEP62304 92 aaKnown RBP3.46□□□□□ -1.86
CMSS1-209ENST00000497345 SLAQ13239 276 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 Q6AWC8 147 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 WDR73Q6P4I2 378 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 COX8CQ7Z4L0 72 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 LURAP1LQ8IV03 231 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 AMN1Q8IY45 258 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 C14orf178Q8N769 122 aaPredicted RBP3.46□□□□□ -1.86
CMSS1-209ENST00000497345 WFDC9Q8NEX5 89 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 GFRA4Q9GZZ7 299 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 JPT2Q9H910 190 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 GSN-AS1Q9NRJ2 163 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 PHLDA3Q9Y5J5 127 aa3.46□□□□□ -1.86
CMSS1-209ENST00000497345 A0A087WWL8 130 aa3.45□□□□□ -1.86
CMSS1-209ENST00000497345 LOC102724200A0A096LPH7 203 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms