RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 Q86TA4 180 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 DPH3Q96FX2 82 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 CCDC167Q9P0B6 97 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 LSM2Q9Y333 95 aaKnown RBP1.15□□□□□ -2.23
SSR3-208ENST00000496050 GRIN2AQ12879 1464 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 BCL9LQ86UU0 1499 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 SYNJ1O43426 1573 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 COL6A3P12111 3177 aa1.15□□□□□ -2.23
SSR3-208ENST00000496050 UHRF1BP1LA0JNW5 1464 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 PITX3O75364 302 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 RBP4P02753 201 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 GYPBP06028 91 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 PYYP10082 97 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 FGF7P21781 194 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 CKS2P33552 79 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 GUCA1AP43080 201 aaPredicted RBP1.14□□□□□ -2.23
SSR3-208ENST00000496050 PCBD1P61457 104 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 LINC01545Q5VT33 79 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 OTOSQ8NHW6 89 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 CCL19Q99731 98 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 ANK1P16157 1881 aa1.14□□□□□ -2.23
SSR3-208ENST00000496050 FBN2P35556 2912 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 ZNF518AQ6AHZ1 1483 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 IGHV1-24A0A0C4DH33 117 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 A0A0G2JMM0 328 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 K7EIL1 84 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 CORTO00230 105 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 CLLU1Q5K131 121 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 Q6ZS92 163 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 ATP6V0E2Q8NHE4 81 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 SNRNP25Q9BV90 132 aaKnown RBP1.13□□□□□ -2.23
SSR3-208ENST00000496050 RIMS1Q86UR5 1692 aaKnown RBP1.13□□□□□ -2.23
SSR3-208ENST00000496050 UBR4Q5T4S7 5183 aa1.13□□□□□ -2.23
SSR3-208ENST00000496050 TRAV12-2A0A075B6T6 113 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 LOC100130705A0A1B0GUX0 176 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 FAM25AB3EWG3 89 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 FAM25CB3EWG5 89 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 FAM25GB3EWG6 89 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 FXYD6P3P58550 94 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 SPINK9Q5DT21 86 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 IDO2Q6ZQW0 420 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.12□□□□□ -2.23
SSR3-208ENST00000496050 PP6455Q8WZ26 134 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 SCN3BQ9NY72 215 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 CTTNBP2Q8WZ74 1663 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 ADGRB1O14514 1584 aa1.12□□□□□ -2.23
SSR3-208ENST00000496050 WDR97A6NE52 1622 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 ZDBF2Q9HCK1 2354 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 ZNF469Q96JG9 3925 aaPredicted RBP1.11□□□□□ -2.23
SSR3-208ENST00000496050 TRAV2A0A0B4J234 112 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 ATP6V1G2-DDX39BF2Z307 99 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 F6UZH7 168 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 MRPS10P82664 201 aaKnown RBP1.11□□□□□ -2.23
SSR3-208ENST00000496050 MEIG1Q5JSS6 88 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 CSAG1Q6PB30 78 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 C12orf57Q99622 126 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 GNG8Q9UK08 70 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 NAIPQ13075 1403 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 TRPM7Q96QT4 1865 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 MBD5Q9P267 1494 aa1.11□□□□□ -2.23
SSR3-208ENST00000496050 FAM135AQ9P2D6 1515 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 MYOM3Q5VTT5 1437 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 TMEM30CPA0ZSE6 113 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 XAF1Q6GPH4 301 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 Q6ZUT4 128 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 SLC25A26Q70HW3 274 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 KCNRGQ8N5I3 272 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 C14orf144Q96I85 54 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 TCEAL7Q9BRU2 100 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 PSMG3Q9BT73 122 aaPredicted RBP1.1□□□□□ -2.23
SSR3-208ENST00000496050 AGPAT4-IT1Q9H0P7 198 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 RERGLQ9H628 205 aa1.1□□□□□ -2.23
SSR3-208ENST00000496050 AKAIN1P0CW23 69 aa1.09□□□□□ -2.23
SSR3-208ENST00000496050 PRB4P10163 310 aaPredicted RBP1.09□□□□□ -2.23
SSR3-208ENST00000496050 SPINT3P49223 89 aa1.09□□□□□ -2.23
SSR3-208ENST00000496050 CAV3P56539 151 aa1.09□□□□□ -2.23
SSR3-208ENST00000496050 MIC13Q5XKP0 118 aa1.09□□□□□ -2.23
SSR3-208ENST00000496050 TAS2R8Q9NYW2 309 aa1.09□□□□□ -2.23
SSR3-208ENST00000496050 MRPL35Q9NZE8 188 aaKnown RBP1.09□□□□□ -2.23
SSR3-208ENST00000496050 NOP16Q9Y3C1 178 aaKnown RBP1.09□□□□□ -2.23
SSR3-208ENST00000496050 IER3IP1Q9Y5U9 82 aa1.09□□□□□ -2.23
SSR3-208ENST00000496050 CHD8Q9HCK8 2581 aa1.09□□□□□ -2.24
SSR3-208ENST00000496050 NALCNQ8IZF0 1738 aa1.09□□□□□ -2.24
SSR3-208ENST00000496050 SPEF2Q9C093 1822 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 SPAARA0A1B0GVQ0 90 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 CCDC179H3BU77 68 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 J3QLW9 94 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 M0R129 80 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 TNFP01375 233 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 ADCYAP1P18509 176 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 RHOHQ15669 191 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 SNX29P2Q8IUI4 249 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 VSTM2AQ8TAG5 236 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 DYNLRB2Q8TF09 96 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 COPS9Q8WXC6 57 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 PPP3R2Q96LZ3 170 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 PDCD10Q9BUL8 212 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 SPANXDQ9BXN6 97 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 NAA60Q9H7X0 242 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 COA4Q9NYJ1 87 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms