RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 FHL2Q14192 279 aa11.34□□□□□ -0.59
YIF1A-209ENST00000494836 TOR2AQ5JU69 321 aa11.34□□□□□ -0.59
YIF1A-209ENST00000494836 ZNF506Q5JVG8 444 aa11.34□□□□□ -0.59
YIF1A-209ENST00000494836 DNLZQ5SXM8 178 aa11.34□□□□□ -0.59
YIF1A-209ENST00000494836 PTH2Q96A98 100 aa11.34□□□□□ -0.59
YIF1A-209ENST00000494836 SMIM12Q96EX1 92 aa11.34□□□□□ -0.59
YIF1A-209ENST00000494836 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
YIF1A-209ENST00000494836 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
YIF1A-209ENST00000494836 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
YIF1A-209ENST00000494836 POM121L12Q8N7R1 296 aa11.33□□□□□ -0.6
YIF1A-209ENST00000494836 VSIG2Q96IQ7 327 aa11.33□□□□□ -0.6
YIF1A-209ENST00000494836 EIF5A2Q9GZV4 153 aaKnown RBP11.33□□□□□ -0.6
YIF1A-209ENST00000494836 HHLA3Q9XRX5 114 aa11.33□□□□□ -0.6
YIF1A-209ENST00000494836 DNAH6Q9C0G6 4158 aa11.32□□□□□ -0.6
YIF1A-209ENST00000494836 PGPEP1LA6NFU8 196 aa11.32□□□□□ -0.6
YIF1A-209ENST00000494836 PAX4O43316 350 aa11.32□□□□□ -0.6
YIF1A-209ENST00000494836 IGLV2-8P01709 118 aa11.32□□□□□ -0.6
YIF1A-209ENST00000494836 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
YIF1A-209ENST00000494836 RPL19P84098 196 aaKnown RBP11.32□□□□□ -0.6
YIF1A-209ENST00000494836 RNF212Q495C1 297 aa11.32□□□□□ -0.6
YIF1A-209ENST00000494836 FAM210AQ96ND0 272 aa11.32□□□□□ -0.6
YIF1A-209ENST00000494836 CRYBA4P53673 196 aa11.31□□□□□ -0.6
YIF1A-209ENST00000494836 PIK3CD-AS1Q5SR53 167 aa11.31□□□□□ -0.6
YIF1A-209ENST00000494836 PCNPQ8WW12 178 aaKnown RBP11.31□□□□□ -0.6
YIF1A-209ENST00000494836 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
YIF1A-209ENST00000494836 RS1O15537 224 aa11.3□□□□□ -0.6
YIF1A-209ENST00000494836 CXCL1P09341 107 aa11.3□□□□□ -0.6
YIF1A-209ENST00000494836 CCL18P55774 89 aa11.3□□□□□ -0.6
YIF1A-209ENST00000494836 CFAP126Q5VTH2 177 aa11.3□□□□□ -0.6
YIF1A-209ENST00000494836 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
YIF1A-209ENST00000494836 SYT8Q8NBV8 401 aa11.3□□□□□ -0.6
YIF1A-209ENST00000494836 DAZAP1Q96EP5 407 aaKnown RBP11.3□□□□□ -0.6
YIF1A-209ENST00000494836 PARLQ9H300 379 aa11.3□□□□□ -0.6
YIF1A-209ENST00000494836 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
YIF1A-209ENST00000494836 A8MWV9 139 aa11.29□□□□□ -0.6
YIF1A-209ENST00000494836 CIDEAO60543 219 aa11.29□□□□□ -0.6
YIF1A-209ENST00000494836 CEBPGP53567 150 aa11.29□□□□□ -0.6
YIF1A-209ENST00000494836 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
YIF1A-209ENST00000494836 ICOSQ9Y6W8 199 aa11.29□□□□□ -0.6
YIF1A-209ENST00000494836 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
YIF1A-209ENST00000494836 A0A096LPF7 62 aa11.28□□□□□ -0.6
YIF1A-209ENST00000494836 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
YIF1A-209ENST00000494836 NDUFS6O75380 124 aaKnown RBP11.28□□□□□ -0.6
YIF1A-209ENST00000494836 MED14OSP0DP75 135 aa11.28□□□□□ -0.6
YIF1A-209ENST00000494836 FAM3BP58499 235 aaPredicted RBP11.28□□□□□ -0.6
YIF1A-209ENST00000494836 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
YIF1A-209ENST00000494836 ZFP82Q8N141 532 aa11.28□□□□□ -0.6
YIF1A-209ENST00000494836 IGHV3-73A0A0B4J1V6 119 aa11.27□□□□□ -0.61
YIF1A-209ENST00000494836 M0R381 172 aa11.27□□□□□ -0.61
YIF1A-209ENST00000494836 P01737 135 aa11.27□□□□□ -0.61
YIF1A-209ENST00000494836 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
YIF1A-209ENST00000494836 GYPEP15421 78 aa11.26□□□□□ -0.61
YIF1A-209ENST00000494836 RPS20P60866 119 aaKnown RBP11.26□□□□□ -0.61
YIF1A-209ENST00000494836 MRPL23Q16540 153 aaKnown RBP11.26□□□□□ -0.61
YIF1A-209ENST00000494836 OR2D3Q8NGH3 330 aa11.26□□□□□ -0.61
YIF1A-209ENST00000494836 LINC00588Q9Y4M8 146 aa11.26□□□□□ -0.61
YIF1A-209ENST00000494836 SRP19P09132 144 aaKnown RBP11.25□□□□□ -0.61
YIF1A-209ENST00000494836 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
YIF1A-209ENST00000494836 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
YIF1A-209ENST00000494836 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
YIF1A-209ENST00000494836 JPT2Q9H910 190 aa11.25□□□□□ -0.61
YIF1A-209ENST00000494836 XKRY2A2RUG3 117 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 K7EN84 100 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 K7EQD1 137 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 RHODO00212 210 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 SNAI2O43623 268 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 OR5AL1P0C617 328 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 SRIP30626 198 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 RHOHQ15669 191 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 ESRGQ1W209 222 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 OR10AG1Q8NH19 301 aa11.24□□□□□ -0.61
YIF1A-209ENST00000494836 SSBP4Q9BWG4 385 aaPredicted RBP11.24□□□□□ -0.61
YIF1A-209ENST00000494836 IGLV2-18A0A075B6J9 118 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 TRBV6-4A0A1B0GX49 114 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 NXPH4O95158 308 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 GZMBP10144 247 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 NUDT10Q8NFP7 164 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 NUDT11Q96G61 164 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 SFRP2Q96HF1 295 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 PRADC1Q9BSG0 188 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 SAMD10Q9BYL1 202 aa11.23□□□□□ -0.61
YIF1A-209ENST00000494836 ZNF727A8MUV8 499 aa11.22□□□□□ -0.61
YIF1A-209ENST00000494836 RAB14P61106 215 aa11.22□□□□□ -0.61
YIF1A-209ENST00000494836 PEA15Q15121 130 aa11.22□□□□□ -0.61
YIF1A-209ENST00000494836 SPANXN1Q5VSR9 72 aa11.22□□□□□ -0.61
YIF1A-209ENST00000494836 UFSP1Q6NVU6 142 aa11.22□□□□□ -0.61
YIF1A-209ENST00000494836 FER1L6-AS1Q8NA97 138 aa11.22□□□□□ -0.61
YIF1A-209ENST00000494836 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
YIF1A-209ENST00000494836 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
YIF1A-209ENST00000494836 MRPS16Q9Y3D3 137 aaKnown RBP11.22□□□□□ -0.61
YIF1A-209ENST00000494836 LY96Q9Y6Y9 160 aa11.22□□□□□ -0.61
YIF1A-209ENST00000494836 DNAH10Q8IVF4 4471 aa11.21□□□□□ -0.61
YIF1A-209ENST00000494836 A0A087WWL8 130 aa11.21□□□□□ -0.61
YIF1A-209ENST00000494836 MUC21A0A0G2JKD1 596 aa11.21□□□□□ -0.61
YIF1A-209ENST00000494836 LOC100131303A0A0U1RQF7 123 aa11.21□□□□□ -0.61
YIF1A-209ENST00000494836 MUC21A0A140T8X8 626 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms