RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MBD3L1Q8WWY6 194 aa8.53□□□□□ -1.04
HSPG2-212ENST00000493940 GRIFINA4D1Z8 144 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 KRBOX1C9JBD0 128 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 SH2D1AO60880 128 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 CDK2AP2O75956 126 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 ORM1P02763 201 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 SEC11BP0C7V7 166 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 BTF3P20290 206 aaKnown RBP8.52□□□□□ -1.05
HSPG2-212ENST00000493940 CCL20P78556 96 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 UFSP1Q6NVU6 142 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 HIST1H2BAQ96A08 127 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 PTH2Q96A98 100 aa8.52□□□□□ -1.05
HSPG2-212ENST00000493940 DNAH8Q96JB1 4490 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 FBLL1A6NHQ2 334 aaKnown RBP8.51□□□□□ -1.05
HSPG2-212ENST00000493940 M0R036 132 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 DNAH10OSP0CZ25 163 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 ZFP69Q49AA0 526 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 CST9LP1Q5W188 147 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 TMUB2Q71RG4 321 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 NHLRC2Q8NBF2 726 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 FAM213BQ8TBF2 198 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 ZNF471Q9BX82 626 aaPredicted RBP8.51□□□□□ -1.05
HSPG2-212ENST00000493940 PARLQ9H300 379 aa8.51□□□□□ -1.05
HSPG2-212ENST00000493940 FAT1Q14517 4588 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 B4DEV8 164 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 H3BVH4 76 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 BCL2L11O43521 198 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 LTAP01374 205 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 ZNF674Q2M3X9 581 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 Q8N3U1 123 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 C14orf178Q8N769 122 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-212ENST00000493940 SFT2D1Q8WV19 159 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 PCNPQ8WW12 178 aaKnown RBP8.5□□□□□ -1.05
HSPG2-212ENST00000493940 LY96Q9Y6Y9 160 aa8.5□□□□□ -1.05
HSPG2-212ENST00000493940 TMSB15BA0A087X1C1 80 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 A0A0D9SG52 128 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 TRBV6-1A0A0K0K1D8 114 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 TRBV6-4A0A1B0GX49 114 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 SCO2A0A1W2PP80 73 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 ARMS2P0C7Q2 107 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 LGALSLQ3ZCW2 172 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-212ENST00000493940 DNLZQ5SXM8 178 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 NKX6-2Q9C056 277 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-212ENST00000493940 IL36BQ9NZH7 164 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 ZFP30Q9Y2G7 519 aa8.49□□□□□ -1.05
HSPG2-212ENST00000493940 LINC00694P0DN24 101 aa8.48□□□□□ -1.05
HSPG2-212ENST00000493940 PPT1P50897 306 aa8.48□□□□□ -1.05
HSPG2-212ENST00000493940 RPL19P84098 196 aaKnown RBP8.48□□□□□ -1.05
HSPG2-212ENST00000493940 MAPKAPK5-AS1Q8N8E1 139 aa8.48□□□□□ -1.05
HSPG2-212ENST00000493940 FMC1Q96HJ9 113 aa8.48□□□□□ -1.05
HSPG2-212ENST00000493940 MLST8Q9BVC4 326 aa8.48□□□□□ -1.05
HSPG2-212ENST00000493940 SCRT2Q9NQ03 307 aa8.48□□□□□ -1.05
HSPG2-212ENST00000493940 CRYGDP07320 174 aa8.47□□□□□ -1.05
HSPG2-212ENST00000493940 S100A4P26447 101 aaKnown RBP8.47□□□□□ -1.05
HSPG2-212ENST00000493940 ASIPP42127 132 aa8.47□□□□□ -1.05
HSPG2-212ENST00000493940 TIRAPP58753 221 aa8.47□□□□□ -1.05
HSPG2-212ENST00000493940 FAM162BQ5T6X4 162 aa8.47□□□□□ -1.05
HSPG2-212ENST00000493940 STOML3Q8TAV4 291 aa8.47□□□□□ -1.05
HSPG2-212ENST00000493940 MSRB1Q9NZV6 116 aa8.47□□□□□ -1.05
HSPG2-212ENST00000493940 HERC1Q15751 4861 aa8.47□□□□□ -1.05
HSPG2-212ENST00000493940 A0A087WTM6 91 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 KANTRA0A1W2PQU2 76 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 GAGE12JA6NER3 117 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 UMAD1C9J7I0 102 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 UBE2G1P62253 170 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 GAGE1Q13065 139 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 GAGE4Q13068 117 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 GAGE5Q13069 117 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 RHOHQ15669 191 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 GAGE13Q4V321 117 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 Q6ZNX1 250 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 Q8N1X5 172 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 DERL1Q9BUN8 251 aa8.46□□□□□ -1.06
HSPG2-212ENST00000493940 A0A087WWL8 130 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 A8MWV9 139 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 CIDEAO60543 219 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 IGHV3-30P01768 117 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 IGHV3-33P01772 117 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 IGHV3-30-3P0DP02 117 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 IGHV3-30-5P0DP03 117 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 MGST1P10620 155 aaKnown RBP8.45□□□□□ -1.06
HSPG2-212ENST00000493940 EVI2AP22794 236 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 AKR1C3P42330 323 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 PIK3CD-AS1Q5SR53 167 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 ZFP2Q6ZN57 461 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 SFRP2Q96HF1 295 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
HSPG2-212ENST00000493940 MUC21A0A0G2JKD1 596 aa8.44□□□□□ -1.06
HSPG2-212ENST00000493940 MUC21A0A140T8X8 626 aa8.44□□□□□ -1.06
HSPG2-212ENST00000493940 LRCOL1A6NCL2 159 aa8.44□□□□□ -1.06
HSPG2-212ENST00000493940 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
HSPG2-212ENST00000493940 IGLV2-8P01709 118 aa8.44□□□□□ -1.06
HSPG2-212ENST00000493940 LINC01556Q5JQF7 62 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms