RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PTPN13Q12923 2485 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 A0A087WX48 190 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 MRPL23Q16540 153 aaKnown RBP10.49□□□□□ -0.73
VCP-207ENST00000493886 C2orf91Q6ZV80 131 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 AGPAT4-IT1Q9H0P7 198 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 CSMD2Q7Z408 3487 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 J3QR89 54 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 EVI2AP22794 236 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 IL17RELQ6ZVW7 336 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 ZNF580Q9UK33 172 aa10.49□□□□□ -0.73
VCP-207ENST00000493886 FABP5P3A8MUU1 101 aa10.48□□□□□ -0.73
VCP-207ENST00000493886 DEFB113Q30KQ7 82 aa10.48□□□□□ -0.73
VCP-207ENST00000493886 RAB37Q96AX2 223 aa10.48□□□□□ -0.73
VCP-207ENST00000493886 C16orf92Q96LL3 132 aa10.48□□□□□ -0.73
VCP-207ENST00000493886 BEX4Q9NWD9 120 aaPredicted RBP10.48□□□□□ -0.73
VCP-207ENST00000493886 MT-ATP8P03928 68 aa10.48□□□□□ -0.73
VCP-207ENST00000493886 IGHV4-31P0DP07 118 aa10.48□□□□□ -0.73
VCP-207ENST00000493886 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
VCP-207ENST00000493886 ZNF493Q6ZR52 646 aa10.48□□□□□ -0.73
VCP-207ENST00000493886 CCDC179H3BU77 68 aa10.47□□□□□ -0.73
VCP-207ENST00000493886 COX8AP10176 69 aa10.47□□□□□ -0.73
VCP-207ENST00000493886 GATA1P15976 413 aaPredicted RBP10.47□□□□□ -0.73
VCP-207ENST00000493886 SRSF2Q01130 221 aaKnown RBP10.47□□□□□ -0.73
VCP-207ENST00000493886 SPAG8Q99932 426 aaPredicted RBP10.47□□□□□ -0.73
VCP-207ENST00000493886 TMEM78Q5T7P6 136 aa10.47□□□□□ -0.73
VCP-207ENST00000493886 C9orf139Q6ZV77 190 aa10.47□□□□□ -0.73
VCP-207ENST00000493886 MS4A6AQ9H2W1 248 aa10.47□□□□□ -0.73
VCP-207ENST00000493886 WIPF1O43516 503 aa10.47□□□□□ -0.73
VCP-207ENST00000493886 NMUP48645 174 aa10.47□□□□□ -0.73
VCP-207ENST00000493886 ZNF575Q86XF7 245 aa10.47□□□□□ -0.73
VCP-207ENST00000493886 CR1P17927 2039 aa10.46□□□□□ -0.73
VCP-207ENST00000493886 CENPEQ02224 2701 aa10.46□□□□□ -0.73
VCP-207ENST00000493886 IGLC6P0CF74 106 aa10.46□□□□□ -0.73
VCP-207ENST00000493886 C9orf47Q6ZRZ4 202 aa10.46□□□□□ -0.73
VCP-207ENST00000493886 SMIM9A6NGZ8 99 aa10.46□□□□□ -0.74
VCP-207ENST00000493886 FSHBP01225 129 aa10.46□□□□□ -0.74
VCP-207ENST00000493886 HBDP02042 147 aa10.46□□□□□ -0.74
VCP-207ENST00000493886 Q6ZQT7 251 aa10.46□□□□□ -0.74
VCP-207ENST00000493886 GPHB5Q86YW7 130 aa10.46□□□□□ -0.74
VCP-207ENST00000493886 LRRC75A-AS1Q8N1F1 130 aa10.46□□□□□ -0.74
VCP-207ENST00000493886 C20orf173Q96LM9 149 aa10.46□□□□□ -0.74
VCP-207ENST00000493886 DKK2Q9UBU2 259 aa10.46□□□□□ -0.74
VCP-207ENST00000493886 PSMB8P28062 276 aa10.45□□□□□ -0.74
VCP-207ENST00000493886 INSL3P51460 131 aa10.45□□□□□ -0.74
VCP-207ENST00000493886 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
VCP-207ENST00000493886 SH2D6Q7Z4S9 175 aa10.45□□□□□ -0.74
VCP-207ENST00000493886 PCP2Q8IVA1 136 aa10.45□□□□□ -0.74
VCP-207ENST00000493886 PSMG3-AS1Q96PY0 264 aa10.45□□□□□ -0.74
VCP-207ENST00000493886 TTTY13Q9BZ97 58 aa10.45□□□□□ -0.74
VCP-207ENST00000493886 C9orf118A6NHY6 69 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 IGHV7-4-1A0A0J9YVY3 117 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 C20orf78Q9BR46 151 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 NAV2Q8IVL1 2488 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 SOCS3O14543 225 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 FGF6P10767 208 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 TMEM97Q5BJF2 176 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 C10orf99Q6UWK7 81 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 C3orf56Q8N813 242 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 DUX5Q96PT3 197 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 RHPN1-AS1Q9BWJ2 59 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 DAZ1Q9NQZ3 744 aaKnown RBP10.44□□□□□ -0.74
VCP-207ENST00000493886 U3KQK5 164 aa10.44□□□□□ -0.74
VCP-207ENST00000493886 ABCA12Q86UK0 2595 aa10.43□□□□□ -0.74
VCP-207ENST00000493886 Q6YL49 198 aa10.43□□□□□ -0.74
VCP-207ENST00000493886 OR5A1Q8NGJ0 315 aa10.43□□□□□ -0.74
VCP-207ENST00000493886 ZANQ9Y493 2812 aa10.43□□□□□ -0.74
VCP-207ENST00000493886 RPL11P62913 178 aaKnown RBP10.43□□□□□ -0.74
VCP-207ENST00000493886 Q96MF0 132 aa10.43□□□□□ -0.74
VCP-207ENST00000493886 GAGE12JA6NER3 117 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 GAGE7O76087 117 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 GAGE12FP0CL80 117 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 GAGE12GP0CL81 117 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 GAGE12IP0CL82 117 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 GAGE4Q13068 117 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 WFDC2Q14508 124 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 ETDBQ3ZM63 59 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 FOXI2Q6ZQN5 318 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 RNF185Q96GF1 192 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 C11orf21Q9P2W6 132 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 CYSLTR1Q9Y271 337 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 IGKV3D-20A0A0C4DH25 116 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 SPRY2O43597 315 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 LEPP41159 167 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 CNFNQ9BYD5 112 aa10.42□□□□□ -0.74
VCP-207ENST00000493886 PRRC2AP48634 2157 aaKnown RBP10.42□□□□□ -0.74
VCP-207ENST00000493886 TRBV20-1A0A075B6N2 111 aa10.41□□□□□ -0.74
VCP-207ENST00000493886 TMEM89A2RUT3 159 aa10.41□□□□□ -0.74
VCP-207ENST00000493886 K7EMT4 169 aa10.41□□□□□ -0.74
VCP-207ENST00000493886 NHLRC4P0CG21 123 aaPredicted RBP10.41□□□□□ -0.74
VCP-207ENST00000493886 EDN2P20800 178 aa10.41□□□□□ -0.74
VCP-207ENST00000493886 LGALS9BQ3B8N2 356 aa10.41□□□□□ -0.74
VCP-207ENST00000493886 LGALS9CQ6DKI2 356 aa10.41□□□□□ -0.74
VCP-207ENST00000493886 MAP1LC3AQ9H492 121 aa10.41□□□□□ -0.74
VCP-207ENST00000493886 SPANXB1Q9NS25 103 aaPredicted RBP10.41□□□□□ -0.74
VCP-207ENST00000493886 LENEPQ9Y5L5 61 aa10.41□□□□□ -0.74
VCP-207ENST00000493886 IGKV3-7A0A075B6H7 116 aa10.4□□□□□ -0.74
VCP-207ENST00000493886 F8WDY8 70 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms