RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 OR5D14Q8NGL3 314 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 OR10K1Q8NGX5 313 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 ZNF431Q8TF32 576 aaPredicted RBP0.48□□□□□ -2.33
ITGB1-216ENST00000493758 PATE1Q8WXA2 126 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 TEX37Q96LM6 180 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 NPCDR1Q9BY65 106 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 KRTAP2-4Q9BYR9 128 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 TAS2R7Q9NYW3 318 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 ORMDL1Q9P0S3 153 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 FAM208AQ9UK61 1670 aaKnown RBP0.48□□□□□ -2.33
ITGB1-216ENST00000493758 EML6Q6ZMW3 1958 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 DENND4CQ5VZ89 1909 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 MGAMO43451 1857 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 KIF1BO60333 1816 aa0.48□□□□□ -2.33
ITGB1-216ENST00000493758 NSD3Q9BZ95 1437 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 MUC17Q685J3 4493 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 KNL1Q8NG31 2342 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 ABCA1O95477 2261 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 TRAV10A0A0B4J240 114 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 IGHV1-58A0A0C4DH39 117 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 DUXBA0A1W2PPF3 345 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 TLCD2A6NGC4 264 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 C17orf112F2Z3M2 114 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 TMEM256-PLSCR3K7ERE1 68 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 M0R233 179 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 CD2P06729 351 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 OR10J4P0C629 311 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 CYBAP13498 195 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 HLA-EP13747 358 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 NFYBP25208 207 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 DYNLT3P51808 116 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 DSCR4P56555 118 aaPredicted RBP0.47□□□□□ -2.33
ITGB1-216ENST00000493758 ARF6P62330 175 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 BASP1P80723 227 aaKnown RBP0.47□□□□□ -2.33
ITGB1-216ENST00000493758 PSG9Q00887 426 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 SPRNQ5BIV9 151 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 HACD4Q5VWC8 232 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 LINC00322Q6ZN03 302 aaPredicted RBP0.47□□□□□ -2.33
ITGB1-216ENST00000493758 TEN1Q86WV5 123 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 LINC00052Q96N35 136 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 ZNF714Q96N38 554 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 PCTPQ9UKL6 214 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 CHCHD2Q9Y6H1 151 aaPredicted RBP0.47□□□□□ -2.33
ITGB1-216ENST00000493758 MYO7AQ13402 2215 aa0.47□□□□□ -2.33
ITGB1-216ENST00000493758 NCOA6Q14686 2063 aaPredicted RBP0.47□□□□□ -2.33
ITGB1-216ENST00000493758 CEP192Q8TEP8 1941 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 ANKRD31Q8N7Z5 1873 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 PATJQ8NI35 1801 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 IGLV3-32A0A0A0MS00 114 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 E7EUB6 86 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 F8W1H4 67 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 H3BRM9 83 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 H7C1C5 153 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 M0R378 163 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 NUPR1O60356 82 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 ERC2-IT1O76042 136 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 APOA2P02652 100 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 C1QBP02746 253 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 PHBP35232 272 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 LCN6P62502 163 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 CDK6Q00534 326 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 AKR1C8PQ5T2L2 129 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 DHRS4L2Q6PKH6 230 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 PLPP5Q8NEB5 264 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 OR5D16Q8NGK9 328 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 OR4K15Q8NH41 348 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 OR13C6PQ8NH95 151 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 PPTC7Q8NI37 304 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 MUCL1Q96DR8 90 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 SMR3AQ99954 134 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 TMEM70Q9BUB7 260 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 PBDC1Q9BVG4 233 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 POPDC3Q9HBV1 291 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 TMEM138Q9NPI0 162 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 MED29Q9NX70 200 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 STOML2Q9UJZ1 356 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 TNFSF18Q9UNG2 199 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 SSR3Q9UNL2 185 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 A0A1B0GUL6 1792 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 ASCC3Q8N3C0 2202 aaKnown RBP0.46□□□□□ -2.34
ITGB1-216ENST00000493758 ZGRF1Q86YA3 2104 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 OBSL1O75147 1896 aa0.46□□□□□ -2.34
ITGB1-216ENST00000493758 CHD3Q12873 2000 aaKnown RBP0.45□□□□□ -2.34
ITGB1-216ENST00000493758 OR2T8A6NH00 312 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 KLF7O75840 302 aaPredicted RBP0.45□□□□□ -2.34
ITGB1-216ENST00000493758 IFNA14P01570 189 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 IFNA4P05014 189 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 CXCL8P10145 99 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 HOXA6P31267 233 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 PPP1R2P41236 205 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 RAB5CP51148 216 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 ROMO1P60602 79 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 GNG5P63218 68 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 RPL19P84098 196 aaKnown RBP0.45□□□□□ -2.34
ITGB1-216ENST00000493758 SNCBQ16143 134 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 ZNF833PQ6ZTB9 187 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 TMED4Q7Z7H5 227 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 RAB37Q96AX2 223 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 ZHX1-C8orf76Q96EF9 292 aa0.45□□□□□ -2.34
ITGB1-216ENST00000493758 OR2J1Q9GZK6 312 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms