RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 C9orf62Q8N4C0 152 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 ZNRF2Q8NHG8 242 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 PCNPQ8WW12 178 aaKnown RBP4.84□□□□□ -1.63
TOP3A-207ENST00000493648 PTH2Q96A98 100 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 ZC2HC1AQ96GY0 325 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 C9orf85Q96MD7 179 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 TXNDC17Q9BRA2 123 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 Q9H8V8 135 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 GNG13Q9P2W3 67 aa4.84□□□□□ -1.63
TOP3A-207ENST00000493648 VPS13DQ5THJ4 4388 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 NBDYA0A0U1RRE5 68 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 SCO2A0A1W2PP80 73 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 PGPEP1LA6NFU8 196 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 KRBOX1C9JBD0 128 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 RS1O15537 224 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 SH2D1AO60880 128 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 RNASE3P12724 160 aaKnown RBP4.83□□□□□ -1.64
TOP3A-207ENST00000493648 SRIP30626 198 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 ZNF674Q2M3X9 581 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 PIK3CD-AS1Q5SR53 167 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 DNLZQ5SXM8 178 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 C1orf134Q5TEV5 83 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 NEGR1Q7Z3B1 354 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 SH2D6Q7Z4S9 175 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 BAGE2Q86Y30 109 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 SYT8Q8NBV8 401 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 UPK3BQ9BT76 320 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 IL36BQ9NZH7 164 aa4.83□□□□□ -1.64
TOP3A-207ENST00000493648 MRPS16Q9Y3D3 137 aaKnown RBP4.83□□□□□ -1.64
TOP3A-207ENST00000493648 GRIFINA4D1Z8 144 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 PRSS29PA6NIE9 313 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 A8MWV9 139 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 K7EQD1 137 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 M0R036 132 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 ARMS2P0C7Q2 107 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 GYPEP15421 78 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 GATA1P15976 413 aaPredicted RBP4.82□□□□□ -1.64
TOP3A-207ENST00000493648 TAGLN2P37802 199 aaKnown RBP4.82□□□□□ -1.64
TOP3A-207ENST00000493648 BLOC1S1P78537 153 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 ZNF506Q5JVG8 444 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 CFAP126Q5VTH2 177 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 LYPD5Q6UWN5 251 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 NHLRC2Q8NBF2 726 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 PRADC1Q9BSG0 188 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
TOP3A-207ENST00000493648 TMSB15BA0A087X1C1 80 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 TRBV6-4A0A1B0GX49 114 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 A0A1W2PPQ1 181 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 RTL8CO15255 209 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 PDE6DO43924 150 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 RPL35P42766 123 aaKnown RBP4.81□□□□□ -1.64
TOP3A-207ENST00000493648 MEF2BQ02080 365 aaPredicted RBP4.81□□□□□ -1.64
TOP3A-207ENST00000493648 TTC32Q5I0X7 151 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 ZFP2Q6ZN57 461 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 C6orf223Q8N319 242 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 DAZAP1Q96EP5 407 aaKnown RBP4.81□□□□□ -1.64
TOP3A-207ENST00000493648 MLST8Q9BVC4 326 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 MED9Q9NWA0 146 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 VAX2Q9UIW0 290 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 PHLDA3Q9Y5J5 127 aa4.81□□□□□ -1.64
TOP3A-207ENST00000493648 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 IGHV3-73A0A0B4J1V6 119 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 H3BVH4 76 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 SIVA1O15304 175 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 NXPH4O95158 308 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 BCL2P10415 239 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 MGST1P10620 155 aaKnown RBP4.8□□□□□ -1.64
TOP3A-207ENST00000493648 BTF3P20290 206 aaKnown RBP4.8□□□□□ -1.64
TOP3A-207ENST00000493648 RHOHQ15669 191 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 PRR27Q6MZM9 219 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 ALKAL2Q6UX46 152 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 SLC25A29Q8N8R3 303 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 C11orf52Q96A22 123 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 BIN3Q9NQY0 253 aa4.8□□□□□ -1.64
TOP3A-207ENST00000493648 LOC100131303A0A0U1RQF7 123 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 M0R381 172 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 RHODO00212 210 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 CXCL1P09341 107 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 MED14OSP0DP75 135 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 GNG4P50150 75 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 CENPWQ5EE01 88 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 ZFP82Q8N141 532 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 Q8N3U1 123 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 SMIM12Q96EX1 92 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 SFRP2Q96HF1 295 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 DERL1Q9BUN8 251 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 PARLQ9H300 379 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 SCRT2Q9NQ03 307 aa4.79□□□□□ -1.64
TOP3A-207ENST00000493648 TRAV8-6A0A0B4J262 113 aa4.78□□□□□ -1.64
TOP3A-207ENST00000493648 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
TOP3A-207ENST00000493648 RBFOX3A6NFN3 312 aa4.78□□□□□ -1.64
TOP3A-207ENST00000493648 K7EP13 123 aa4.78□□□□□ -1.64
TOP3A-207ENST00000493648 TIRAPP58753 221 aa4.78□□□□□ -1.64
TOP3A-207ENST00000493648 RPS20P60866 119 aaKnown RBP4.78□□□□□ -1.64
TOP3A-207ENST00000493648 RPL19P84098 196 aaKnown RBP4.78□□□□□ -1.64
TOP3A-207ENST00000493648 FAM74A4Q5TZK3 123 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 271.3 ms