RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 DNLZQ5SXM8 178 aa9.78□□□□□ -0.84
CCM2-217ENST00000492883 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
CCM2-217ENST00000492883 PTH2Q96A98 100 aa9.78□□□□□ -0.84
CCM2-217ENST00000492883 PRO0255Q9UI72 69 aa9.78□□□□□ -0.84
CCM2-217ENST00000492883 PHLDA3Q9Y5J5 127 aa9.78□□□□□ -0.84
CCM2-217ENST00000492883 PAX4O43316 350 aa9.77□□□□□ -0.85
CCM2-217ENST00000492883 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.85
CCM2-217ENST00000492883 SYT8Q8NBV8 401 aa9.77□□□□□ -0.85
CCM2-217ENST00000492883 STARD9Q9P2P6 4700 aa9.77□□□□□ -0.85
CCM2-217ENST00000492883 H3BNG1 76 aa9.76□□□□□ -0.85
CCM2-217ENST00000492883 NDUFS6O75380 124 aaKnown RBP9.76□□□□□ -0.85
CCM2-217ENST00000492883 RAB14P61106 215 aa9.76□□□□□ -0.85
CCM2-217ENST00000492883 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
CCM2-217ENST00000492883 OCC1Q8TAD7 63 aa9.76□□□□□ -0.85
CCM2-217ENST00000492883 VSIG2Q96IQ7 327 aa9.76□□□□□ -0.85
CCM2-217ENST00000492883 A8MWV9 139 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 M0R381 172 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 RS1O15537 224 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 P01737 135 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 SRP19P09132 144 aaKnown RBP9.75□□□□□ -0.85
CCM2-217ENST00000492883 CRYBA4P53673 196 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 PEA15Q15121 130 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 CFAP126Q5VTH2 177 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 DMRTA1Q5VZB9 504 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 OR2D3Q8NGH3 330 aa9.75□□□□□ -0.85
CCM2-217ENST00000492883 IGHV3-73A0A0B4J1V6 119 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 C19orf71A6NCJ1 209 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 ZNF727A8MUV8 499 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 CIDEAO60543 219 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 CXCL1P09341 107 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 CCL18P55774 89 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 RPS20P60866 119 aaKnown RBP9.74□□□□□ -0.85
CCM2-217ENST00000492883 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 ZFP82Q8N141 532 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 SMIM7Q9BQ49 75 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 SCRT2Q9NQ03 307 aa9.74□□□□□ -0.85
CCM2-217ENST00000492883 CSMD3Q7Z407 3707 aa9.73□□□□□ -0.85
CCM2-217ENST00000492883 XKRY2A2RUG3 117 aa9.73□□□□□ -0.85
CCM2-217ENST00000492883 MED14OSP0DP75 135 aa9.73□□□□□ -0.85
CCM2-217ENST00000492883 RNF212Q495C1 297 aa9.73□□□□□ -0.85
CCM2-217ENST00000492883 NUDT10Q8NFP7 164 aa9.73□□□□□ -0.85
CCM2-217ENST00000492883 NUDT11Q96G61 164 aa9.73□□□□□ -0.85
CCM2-217ENST00000492883 ICOSQ9Y6W8 199 aa9.73□□□□□ -0.85
CCM2-217ENST00000492883 A0A096LPF7 62 aa9.72□□□□□ -0.85
CCM2-217ENST00000492883 K7EN84 100 aa9.72□□□□□ -0.85
CCM2-217ENST00000492883 SSTP61278 116 aa9.72□□□□□ -0.85
CCM2-217ENST00000492883 SRSF3P84103 164 aaKnown RBP9.72□□□□□ -0.85
CCM2-217ENST00000492883 TPPP3Q9BW30 176 aa9.72□□□□□ -0.85
CCM2-217ENST00000492883 RNASE7Q9H1E1 156 aaKnown RBP9.72□□□□□ -0.85
CCM2-217ENST00000492883 MUC21A0A0G2JKD1 596 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 MUC21A0A140T8X8 626 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 C9JQL5 133 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 SNAI2O43623 268 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 OR5AL1P0C617 328 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 GZMBP10144 247 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 GYPEP15421 78 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 GATA1P15976 413 aaPredicted RBP9.71□□□□□ -0.86
CCM2-217ENST00000492883 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.86
CCM2-217ENST00000492883 SPANXN1Q5VSR9 72 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 OR10AG1Q8NH19 301 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 SSBP4Q9BWG4 385 aaPredicted RBP9.71□□□□□ -0.86
CCM2-217ENST00000492883 SAMD10Q9BYL1 202 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 JPT2Q9H910 190 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 LY96Q9Y6Y9 160 aa9.71□□□□□ -0.86
CCM2-217ENST00000492883 TENM2Q9NT68 2774 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 TRBV6-4A0A1B0GX49 114 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 ERVFC1-1P60608 527 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 FAM74A3Q4VXF1 159 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 FAM74A4Q5TZK3 123 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 ZFP2Q6ZN57 461 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 FER1L6-AS1Q8NA97 138 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 SFRP2Q96HF1 295 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 PRADC1Q9BSG0 188 aa9.7□□□□□ -0.86
CCM2-217ENST00000492883 RPP21Q9H633 154 aaKnown RBP9.7□□□□□ -0.86
CCM2-217ENST00000492883 A0A087WWL8 130 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 K7EQD1 137 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 RHODO00212 210 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 GATCO43716 136 aaKnown RBP9.69□□□□□ -0.86
CCM2-217ENST00000492883 SRIP30626 198 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
CCM2-217ENST00000492883 ESRGQ1W209 222 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 TMEM241Q24JQ0 296 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 NEGR1Q7Z3B1 354 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 LINC01551Q86U37 167 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
CCM2-217ENST00000492883 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
CCM2-217ENST00000492883 A0A1W2PPQ1 181 aa9.68□□□□□ -0.86
CCM2-217ENST00000492883 F2Z2F3 143 aa9.68□□□□□ -0.86
CCM2-217ENST00000492883 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
CCM2-217ENST00000492883 IFITM2Q01629 132 aa9.68□□□□□ -0.86
CCM2-217ENST00000492883 RHOHQ15669 191 aa9.68□□□□□ -0.86
CCM2-217ENST00000492883 CLLU1Q5K131 121 aa9.68□□□□□ -0.86
CCM2-217ENST00000492883 DYNC2H1Q8NCM8 4307 aaKnown RBP9.68□□□□□ -0.86
CCM2-217ENST00000492883 IGLV2-18A0A075B6J9 118 aa9.67□□□□□ -0.86
CCM2-217ENST00000492883 NXPH4O95158 308 aa9.67□□□□□ -0.86
CCM2-217ENST00000492883 CRYGDP07320 174 aa9.67□□□□□ -0.86
CCM2-217ENST00000492883 CACNG7P62955 275 aa9.67□□□□□ -0.86
CCM2-217ENST00000492883 SOHLH1Q5JUK2 328 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms