RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 GAGE10A6NGK3 116 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 EDN2P20800 178 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 IFI27P40305 119 aaPredicted RBP7.09□□□□□ -1.28
BRCA1-219ENST00000491747 PDE6HQ13956 83 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 LGALS9BQ3B8N2 356 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 LGALS9CQ6DKI2 356 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 GTF2H5Q6ZYL4 71 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 ZNF502Q8TBZ5 544 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 EEF1AKMT3Q96AZ1 226 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 RNF125Q96EQ8 232 aa7.09□□□□□ -1.28
BRCA1-219ENST00000491747 D6R8Y8 96 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 F8W735 103 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-219ENST00000491747 K7EIM0 57 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 SNAI2O43623 268 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 NCR2O95944 276 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 CLEC3BP05452 202 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 CRIP1P50238 77 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 ADAMTSL5Q6ZMM2 481 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 OR9G4Q8NGQ1 327 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 MRAPQ8TCY5 172 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 C17orf77Q96MU5 243 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 SIGLEC8Q9NYZ4 499 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 TRBV7-1A0A0A6YYK4 115 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 LOC389332A0A1B0GUA5 103 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 HBDP02042 147 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 IL4P05112 153 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 FGF6P10767 208 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 ARL3P36405 182 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 FAM104BQ5XKR9 115 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 ZNF414Q96IQ9 312 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 PRELID3AQ96N28 172 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 PRR25Q96S07 402 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 U3KQK5 164 aa7.08□□□□□ -1.28
BRCA1-219ENST00000491747 A0A096LNJ9 63 aa7.07□□□□□ -1.28
BRCA1-219ENST00000491747 TMEM189A5PLL7 270 aa7.07□□□□□ -1.28
BRCA1-219ENST00000491747 H3BRM9 83 aa7.07□□□□□ -1.28
BRCA1-219ENST00000491747 SIVA1O15304 175 aa7.07□□□□□ -1.28
BRCA1-219ENST00000491747 INSL3P51460 131 aa7.07□□□□□ -1.28
BRCA1-219ENST00000491747 BOD1L2Q8IYS8 172 aa7.07□□□□□ -1.28
BRCA1-219ENST00000491747 THYN1Q9P016 225 aa7.07□□□□□ -1.28
BRCA1-219ENST00000491747 RABAC1Q9UI14 185 aa7.07□□□□□ -1.28
BRCA1-219ENST00000491747 M0R3E3 92 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 FCGR2BP31994 310 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-219ENST00000491747 HSD52Q0P140 79 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 FAM106AQ4KMX7 169 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 LYZL1Q6UWQ5 148 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 IGHV3-35A0A0C4DH35 117 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 MRPS12O15235 138 aaKnown RBP7.06□□□□□ -1.28
BRCA1-219ENST00000491747 IGLV1-51P01701 117 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 CACNG7P62955 275 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 GPHB5Q86YW7 130 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 AMN1Q8IY45 258 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 C8orf49Q96NF6 230 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 ASCL2Q99929 193 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 TGP01266 2768 aa7.06□□□□□ -1.28
BRCA1-219ENST00000491747 FBLL1A6NHQ2 334 aaKnown RBP7.05□□□□□ -1.28
BRCA1-219ENST00000491747 GNG7O60262 68 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 UNQ9165/PRO28630Q6UXU0 137 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 IFI27L1Q96BM0 104 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 C21orf62Q9NYP8 219 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 ZNF256Q9Y2P7 627 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-219ENST00000491747 SELENOKQ9Y6D0 94 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 TMEM213A2RRL7 107 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 SH2D1AO60880 128 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 CKS2P33552 79 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 PSMG4Q5JS54 123 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 UFSP1Q6NVU6 142 aa7.05□□□□□ -1.28
BRCA1-219ENST00000491747 TMSB15BA0A087X1C1 80 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 LGALS9O00182 355 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 MRPL51Q4U2R6 128 aaKnown RBP7.04□□□□□ -1.28
BRCA1-219ENST00000491747 DEFB121Q5J5C9 76 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 COX8CQ7Z4L0 72 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 CSTL1Q9H114 145 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 H3BUT2 72 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 CTSGP08311 255 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 BMI1P35226 326 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 KIR3DS1Q14943 382 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 TM4SF20Q53R12 229 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 PEMTQ9UBM1 199 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 SORL1Q92673 2214 aa7.04□□□□□ -1.28
BRCA1-219ENST00000491747 K7EP34 96 aa7.03□□□□□ -1.28
BRCA1-219ENST00000491747 RPL7P18124 248 aaKnown RBP7.03□□□□□ -1.28
BRCA1-219ENST00000491747 TWIST1Q15672 202 aa7.03□□□□□ -1.28
BRCA1-219ENST00000491747 FER1L6-AS1Q8NA97 138 aa7.03□□□□□ -1.28
BRCA1-219ENST00000491747 OR2K2Q8NGT1 345 aa7.03□□□□□ -1.28
BRCA1-219ENST00000491747 IGHV3OR16-8A0A075B7F1 116 aa7.03□□□□□ -1.28
BRCA1-219ENST00000491747 NMUP48645 174 aa7.03□□□□□ -1.28
BRCA1-219ENST00000491747 MFAP4P55083 255 aa7.03□□□□□ -1.28
BRCA1-219ENST00000491747 OR5A1Q8NGJ0 315 aa7.03□□□□□ -1.28
BRCA1-219ENST00000491747 COL7A1Q02388 2944 aa7.02□□□□□ -1.28
BRCA1-219ENST00000491747 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.29
BRCA1-219ENST00000491747 SCGB2A1O75556 95 aa7.02□□□□□ -1.29
BRCA1-219ENST00000491747 NPYP01303 97 aa7.02□□□□□ -1.29
BRCA1-219ENST00000491747 PRB4P10163 310 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-219ENST00000491747 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-219ENST00000491747 ATP6V0BQ99437 205 aa7.02□□□□□ -1.29
BRCA1-219ENST00000491747 MAP1LC3AQ9H492 121 aa7.02□□□□□ -1.29
BRCA1-219ENST00000491747 S100A7P31151 101 aa7.02□□□□□ -1.29
BRCA1-219ENST00000491747 DEFB114Q30KQ6 69 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms