RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SSBP4Q9BWG4 385 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-208ENST00000490942 K7EN84 100 aa11.19□□□□□ -0.62
TRA2A-208ENST00000490942 ZFAND6Q6FIF0 208 aa11.19□□□□□ -0.62
TRA2A-208ENST00000490942 NAT8Q9UHE5 227 aa11.19□□□□□ -0.62
TRA2A-208ENST00000490942 OR5AL1P0C617 328 aa11.18□□□□□ -0.62
TRA2A-208ENST00000490942 ARMS2P0C7Q2 107 aa11.18□□□□□ -0.62
TRA2A-208ENST00000490942 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
TRA2A-208ENST00000490942 CT83Q5H943 113 aa11.18□□□□□ -0.62
TRA2A-208ENST00000490942 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
TRA2A-208ENST00000490942 NUDT10Q8NFP7 164 aa11.18□□□□□ -0.62
TRA2A-208ENST00000490942 OR2D3Q8NGH3 330 aa11.18□□□□□ -0.62
TRA2A-208ENST00000490942 NUDT11Q96G61 164 aa11.18□□□□□ -0.62
TRA2A-208ENST00000490942 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
TRA2A-208ENST00000490942 TMSB15BA0A087X1C1 80 aa11.17□□□□□ -0.62
TRA2A-208ENST00000490942 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
TRA2A-208ENST00000490942 H3BVH4 76 aa11.17□□□□□ -0.62
TRA2A-208ENST00000490942 SNAI2O43623 268 aa11.17□□□□□ -0.62
TRA2A-208ENST00000490942 SLAQ13239 276 aa11.17□□□□□ -0.62
TRA2A-208ENST00000490942 RPP21Q9H633 154 aaKnown RBP11.17□□□□□ -0.62
TRA2A-208ENST00000490942 PHLDA3Q9Y5J5 127 aa11.17□□□□□ -0.62
TRA2A-208ENST00000490942 A0A1W2PPQ1 181 aa11.16□□□□□ -0.62
TRA2A-208ENST00000490942 GRIFINA4D1Z8 144 aa11.16□□□□□ -0.62
TRA2A-208ENST00000490942 LINC00862A6NCI5 91 aa11.16□□□□□ -0.62
TRA2A-208ENST00000490942 A8MWV9 139 aa11.16□□□□□ -0.62
TRA2A-208ENST00000490942 H3BNG1 76 aa11.16□□□□□ -0.62
TRA2A-208ENST00000490942 RPL19P84098 196 aaKnown RBP11.16□□□□□ -0.62
TRA2A-208ENST00000490942 ZFP82Q8N141 532 aa11.16□□□□□ -0.62
TRA2A-208ENST00000490942 OSTCQ9NRP0 149 aa11.16□□□□□ -0.62
TRA2A-208ENST00000490942 F2Z2F3 143 aa11.15□□□□□ -0.62
TRA2A-208ENST00000490942 NXPH4O95158 308 aa11.15□□□□□ -0.62
TRA2A-208ENST00000490942 SFTA3P0C7M3 94 aa11.15□□□□□ -0.62
TRA2A-208ENST00000490942 IGLC6P0CF74 106 aa11.15□□□□□ -0.62
TRA2A-208ENST00000490942 ERVFC1-1P60608 527 aa11.15□□□□□ -0.62
TRA2A-208ENST00000490942 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
TRA2A-208ENST00000490942 RNASE7Q9H1E1 156 aaKnown RBP11.15□□□□□ -0.62
TRA2A-208ENST00000490942 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 F5H768 121 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 RS1O15537 224 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
TRA2A-208ENST00000490942 WDR73Q6P4I2 378 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 ZFP2Q6ZN57 461 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 FER1L6-AS1Q8NA97 138 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 C15orf53Q8NAA6 179 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 OR4C5Q8NGB2 326 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 ISOC2Q96AB3 205 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 MUC4Q99102 2169 aa11.14□□□□□ -0.63
TRA2A-208ENST00000490942 IGHV4-4A0A075B6R2 117 aa11.13□□□□□ -0.63
TRA2A-208ENST00000490942 A8MWL6 223 aa11.13□□□□□ -0.63
TRA2A-208ENST00000490942 IGLL5B9A064 214 aa11.13□□□□□ -0.63
TRA2A-208ENST00000490942 GATCO43716 136 aaKnown RBP11.13□□□□□ -0.63
TRA2A-208ENST00000490942 HTN3P15516 51 aa11.13□□□□□ -0.63
TRA2A-208ENST00000490942 HOXA5P20719 270 aa11.13□□□□□ -0.63
TRA2A-208ENST00000490942 POM121L12Q8N7R1 296 aa11.13□□□□□ -0.63
TRA2A-208ENST00000490942 RHODO00212 210 aa11.12□□□□□ -0.63
TRA2A-208ENST00000490942 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
TRA2A-208ENST00000490942 CACNG7P62955 275 aa11.12□□□□□ -0.63
TRA2A-208ENST00000490942 FHL2Q14192 279 aa11.12□□□□□ -0.63
TRA2A-208ENST00000490942 CFAP126Q5VTH2 177 aa11.12□□□□□ -0.63
TRA2A-208ENST00000490942 CNFNQ9BYD5 112 aa11.12□□□□□ -0.63
TRA2A-208ENST00000490942 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
TRA2A-208ENST00000490942 PRO0255Q9UI72 69 aa11.12□□□□□ -0.63
TRA2A-208ENST00000490942 APLNQ9ULZ1 77 aa11.12□□□□□ -0.63
TRA2A-208ENST00000490942 CSMD3Q7Z407 3707 aa11.11□□□□□ -0.63
TRA2A-208ENST00000490942 TMEM218A2RU14 115 aa11.11□□□□□ -0.63
TRA2A-208ENST00000490942 CTRLP40313 264 aa11.11□□□□□ -0.63
TRA2A-208ENST00000490942 ADIRFQ15847 76 aa11.11□□□□□ -0.63
TRA2A-208ENST00000490942 TMEM88Q6PEY1 159 aa11.11□□□□□ -0.63
TRA2A-208ENST00000490942 COMMD7Q86VX2 200 aa11.11□□□□□ -0.63
TRA2A-208ENST00000490942 SFRP2Q96HF1 295 aa11.11□□□□□ -0.63
TRA2A-208ENST00000490942 ZNF479Q96JC4 524 aa11.11□□□□□ -0.63
TRA2A-208ENST00000490942 SPANXN1Q5VSR9 72 aa11.1□□□□□ -0.63
TRA2A-208ENST00000490942 OR10AG1Q8NH19 301 aa11.1□□□□□ -0.63
TRA2A-208ENST00000490942 TSKUQ8WUA8 353 aa11.1□□□□□ -0.63
TRA2A-208ENST00000490942 HHLA3Q9XRX5 114 aa11.1□□□□□ -0.63
TRA2A-208ENST00000490942 DYNC2H1Q8NCM8 4307 aaKnown RBP11.1□□□□□ -0.63
TRA2A-208ENST00000490942 STARD9Q9P2P6 4700 aa11.1□□□□□ -0.63
TRA2A-208ENST00000490942 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
TRA2A-208ENST00000490942 TRGV4A0A0C4DH28 118 aa11.09□□□□□ -0.63
TRA2A-208ENST00000490942 TRBV6-4A0A1B0GX49 114 aa11.09□□□□□ -0.63
TRA2A-208ENST00000490942 M0R381 172 aa11.09□□□□□ -0.63
TRA2A-208ENST00000490942 CRYBA4P53673 196 aa11.09□□□□□ -0.63
TRA2A-208ENST00000490942 OR10G8Q8NGN5 311 aa11.09□□□□□ -0.63
TRA2A-208ENST00000490942 SEC11CQ9BY50 192 aa11.09□□□□□ -0.63
TRA2A-208ENST00000490942 V9GYV3 84 aa11.09□□□□□ -0.63
TRA2A-208ENST00000490942 IGHV3-53P01767 116 aa11.08□□□□□ -0.64
TRA2A-208ENST00000490942 GZMBP10144 247 aa11.08□□□□□ -0.64
TRA2A-208ENST00000490942 GATA1P15976 413 aaPredicted RBP11.08□□□□□ -0.64
TRA2A-208ENST00000490942 UFSP1Q6NVU6 142 aa11.08□□□□□ -0.64
TRA2A-208ENST00000490942 GTSF1Q8WW33 167 aa11.08□□□□□ -0.64
TRA2A-208ENST00000490942 VSIG2Q96IQ7 327 aa11.08□□□□□ -0.64
TRA2A-208ENST00000490942 PPP1R2P9O14990 202 aa11.07□□□□□ -0.64
TRA2A-208ENST00000490942 LYZL1Q6UWQ5 148 aa11.07□□□□□ -0.64
TRA2A-208ENST00000490942 AP1S3Q96PC3 154 aa11.07□□□□□ -0.64
TRA2A-208ENST00000490942 PAX4O43316 350 aa11.06□□□□□ -0.64
TRA2A-208ENST00000490942 CRYGDP07320 174 aa11.06□□□□□ -0.64
TRA2A-208ENST00000490942 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
TRA2A-208ENST00000490942 TPPP3Q9BW30 176 aa11.06□□□□□ -0.64
TRA2A-208ENST00000490942 F8W036 122 aa11.05□□□□□ -0.64
TRA2A-208ENST00000490942 TRGC1P0CF51 173 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms