RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 HLA-DMBP28068 263 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 GFI1BQ5VTD9 330 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 RNASEKQ6P5S7 137 aaKnown RBP4.78□□□□□ -1.64
SF3A3-208ENST00000489537 DEFB125Q8N687 156 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 ZFAND2AQ8N6M9 145 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 OR10AG1Q8NH19 301 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 RAX2Q96IS3 184 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 PRELID3AQ96N28 172 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 AP1S3Q96PC3 154 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 DUX5Q96PT3 197 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 MAP1LC3AQ9H492 121 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 PHLDA3Q9Y5J5 127 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 TENM1Q9UKZ4 2725 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 NBEAL1Q6ZS30 2694 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 IFITM10A6NMD0 228 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 PRSS47A8MTI9 375 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 PRAC2D3DTV9 90 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 M0R381 172 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 CCL24O00175 119 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 LEPROTL1O95214 131 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 GZMBP10144 247 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 HLA-DRB4P13762 266 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 BTF3P20290 206 aaKnown RBP4.77□□□□□ -1.65
SF3A3-208ENST00000489537 RNASE4P34096 147 aaKnown RBP4.77□□□□□ -1.65
SF3A3-208ENST00000489537 INSL3P51460 131 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 ZNF80P51504 273 aaPredicted RBP4.77□□□□□ -1.65
SF3A3-208ENST00000489537 FHL3Q13643 280 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 KIR3DS1Q14943 382 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 KIAA1644Q3SXP7 199 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 PYY3Q5JQD4 70 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 IGFL4Q6B9Z1 124 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 MRPL52Q86TS9 123 aaKnown RBP4.77□□□□□ -1.65
SF3A3-208ENST00000489537 NIT1Q86X76 327 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 NDUFA11Q86Y39 141 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 TMEM256Q8N2U0 113 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 SPATA3Q8NHX4 192 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 LINC01006Q8NI28 216 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 MAP1LC3CQ9BXW4 147 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 DPH3P1Q9H4G8 78 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 GSN-AS1Q9NRJ2 163 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 HLA-DRB4X5D2U9 266 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 TRRAPQ9Y4A5 3859 aa4.77□□□□□ -1.65
SF3A3-208ENST00000489537 TMSB15BA0A087X1C1 80 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 IGKV3D-20A0A0C4DH25 116 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 A8MTW9 85 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 HSBP1L1C9JCN9 74 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 ZNF688P0C7X2 276 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 DEFB114Q30KQ6 69 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 LBHQ53QV2 105 aaPredicted RBP4.76□□□□□ -1.65
SF3A3-208ENST00000489537 GDF5OSQ5U4N7 250 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 PET117Q6UWS5 81 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 PTH2Q96A98 100 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 C20orf78Q9BR46 151 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 LINC00467Q9BRT7 94 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 TMEM70Q9BUB7 260 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 C1QTNF4Q9BXJ3 329 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 TP53TG3Q9ULZ0 132 aa4.76□□□□□ -1.65
SF3A3-208ENST00000489537 IGKV3-7A0A075B6H7 116 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 IGHV1OR15-1A0A075B7D0 117 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 LINC01546A6NGU7 62 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 D6R8Y8 96 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 H7C1H1 209 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 CRXO43186 299 aaPredicted RBP4.75□□□□□ -1.65
SF3A3-208ENST00000489537 NXPH4O95158 308 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 CSN3P07498 182 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 ZNF705DP0CH99 300 aaPredicted RBP4.75□□□□□ -1.65
SF3A3-208ENST00000489537 ZNF705BP0CI00 300 aaPredicted RBP4.75□□□□□ -1.65
SF3A3-208ENST00000489537 SLURP1P55000 103 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 RPL32P62910 135 aaKnown RBP4.75□□□□□ -1.65
SF3A3-208ENST00000489537 MRPL51Q4U2R6 128 aaKnown RBP4.75□□□□□ -1.65
SF3A3-208ENST00000489537 ORMDL2Q53FV1 153 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 ANKRD39Q53RE8 183 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 SPATA12Q7Z6I5 190 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 DLX4Q92988 240 aaPredicted RBP4.75□□□□□ -1.65
SF3A3-208ENST00000489537 SPXQ9BT56 116 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 MCRIP2Q9BUT9 160 aaKnown RBP4.75□□□□□ -1.65
SF3A3-208ENST00000489537 VAMP8Q9BV40 100 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 KRTAP4-5Q9BYR2 181 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 SCRT2Q9NQ03 307 aa4.75□□□□□ -1.65
SF3A3-208ENST00000489537 OR11H12B2RN74 326 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 CIDEAO60543 219 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 ATP5LO75964 103 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 INSP01308 110 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 HBDP02042 147 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 KRTDAPP60985 99 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 ANXA2RQ3ZCQ2 193 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 C10orf99Q6UWK7 81 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 AMN1Q8IY45 258 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 Q8N8P6 123 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 ESM1Q9NQ30 184 aa4.74□□□□□ -1.65
SF3A3-208ENST00000489537 ZMAT5Q9UDW3 170 aaKnown RBP4.74□□□□□ -1.65
SF3A3-208ENST00000489537 A8MWV9 139 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 H3BMM0 161 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 H3BVH4 76 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 RHODO00212 210 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 TNFRSF6BO95407 300 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 CD7P09564 240 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 FRMD6-AS1P0C7T7 363 aa4.73□□□□□ -1.65
SF3A3-208ENST00000489537 TFPI2P48307 235 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms