RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 KRTAP6-2Q3LI66 62 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 LYRM2Q9NU23 88 aaPredicted RBP-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 LAMTOR3Q9UHA4 124 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 PKD1L2Q7Z442 2459 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 CSPG4Q6UVK1 2322 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 PKHD1L1Q86WI1 4243 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 CDK12Q9NYV4 1490 aaPredicted RBP-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 USP54Q70EL1 1684 aa-0.69□□□□□ -2.52
CCDC93-209ENST00000488908 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.7□□□□□ -2.521e-5■■■■□ 21.5
CCDC93-209ENST00000488908 ITGB3BPQ13352 177 aaPredicted RBP-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 CLEC2BQ92478 149 aa-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 AP3S1Q92572 193 aa-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 TMEM141Q96I45 108 aa-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 PHB2Q99623 299 aa-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 BET1LQ9NYM9 111 aa-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 IL20Q9NYY1 176 aa-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 HELZP42694 1942 aaKnown RBP-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 NBASA2RRP1 2371 aa-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 TANC2Q9HCD6 1990 aa-0.7□□□□□ -2.52
CCDC93-209ENST00000488908 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 LOC107986453A0A1B0GWG9 222 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 ATG12O94817 140 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 IGKCP01834 107 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 APOC1P02654 83 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 APODP05090 189 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 PYYP10082 97 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 IL7P13232 177 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 GTF2A1P52655 376 aaPredicted RBP-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 MAXP61244 160 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 OR5H6Q8NGV6 325 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 SMIM11BQ8TCY0 68 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 CYP4F30PQ9H0H9 118 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 AKAP9Q99996 3911 aa-0.71□□□□□ -2.52
CCDC93-209ENST00000488908 RELNP78509 3460 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 ADGBQ8N7X0 1667 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 TRAPPC8Q9Y2L5 1435 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 SPTBN1Q01082 2364 aaKnown RBP-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 GVQW2A0A096LPI5 108 aaPredicted RBP-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 EDF1O60869 148 aaKnown RBP-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 IFNA6P05013 189 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 EMX2Q04743 252 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 UNQ5815/PRO19632Q6UWF5 114 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 Q8IZM0 81 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 PRELID3AQ96N28 172 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 Q96NJ1 140 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 SMIM7Q9BQ49 75 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 NHSL1Q5SYE7 1610 aa-0.72□□□□□ -2.52
CCDC93-209ENST00000488908 REV3LO60673 3130 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 KIAA0100Q14667 2235 aaKnown RBP-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 PCF11O94913 1555 aaKnown RBP-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 TRAV17A0A0B4J275 112 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 TRBV10-1A0A0K0K1A3 114 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 K7EQZ3 153 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 CDC42EP2O14613 210 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 IFNA21P01568 189 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 S100A6P06703 90 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 FABP2P12104 132 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 ELOF1P60002 83 aaKnown RBP-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 ERVS71-1P61550 626 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 LSM3P62310 102 aaKnown RBP-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 WFDC2Q14508 124 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 IQCJQ1A5X6 159 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 OR5A2Q8NGI9 324 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 BORCS8Q96FH0 119 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 SPRR2FQ96RM1 72 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 VPS25Q9BRG1 176 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 LRTM1Q9HBL6 345 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 TAF9BQ9HBM6 251 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 OTORQ9NRC9 128 aa-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 VIRMAQ69YN4 1812 aaKnown RBP-0.73□□□□□ -2.53
CCDC93-209ENST00000488908 TRANK1O15050 2925 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 BPTFQ12830 3046 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 RBAKDNA6NC62 111 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 ZNF670-ZNF695F2Z2N8 137 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 M0R2T5 61 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 M0R3E3 92 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 MT1HL1P0DM35 61 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 OR13C6PQ8NH95 151 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 PARVGQ9HBI0 331 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 TMEM242Q9NWH2 141 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 NUBP2Q9Y5Y2 271 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 ADGRG4Q8IZF6 3080 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 IQSEC2Q5JU85 1478 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 DLC1Q96QB1 1528 aa-0.74□□□□□ -2.53
CCDC93-209ENST00000488908 KNL1Q8NG31 2342 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 TRIOO75962 3097 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 MYH2Q9UKX2 1941 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 PGRMC1O00264 195 aaKnown RBP-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 OR2H2O95918 312 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 CTXN2P0C2S0 81 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 SRP9P49458 86 aaKnown RBP-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 POLR2JP52435 117 aaKnown RBP-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 ARF6P62330 175 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 RPL19P84098 196 aaKnown RBP-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 TMED2Q15363 201 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 SPAG11AQ6PDA7 123 aa-0.75□□□□□ -2.53
CCDC93-209ENST00000488908 FKBP11Q9NYL4 201 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms