RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 HHLA3Q9XRX5 114 aa10.12□□□□□ -0.79
CHD1L-208ENST00000488864 TEX48A0A1B0GUV7 120 aa10.12□□□□□ -0.79
CHD1L-208ENST00000488864 GNG7O60262 68 aa10.12□□□□□ -0.79
CHD1L-208ENST00000488864 ATP5G2Q06055 141 aa10.12□□□□□ -0.79
CHD1L-208ENST00000488864 CLEC19AQ6UXS0 136 aa10.12□□□□□ -0.79
CHD1L-208ENST00000488864 RNF185Q96GF1 192 aa10.12□□□□□ -0.79
CHD1L-208ENST00000488864 CCDC140Q96MF4 163 aa10.12□□□□□ -0.79
CHD1L-208ENST00000488864 CLEC3BP05452 202 aa10.11□□□□□ -0.79
CHD1L-208ENST00000488864 MFAP4P55083 255 aa10.11□□□□□ -0.79
CHD1L-208ENST00000488864 IGFL4Q6B9Z1 124 aa10.11□□□□□ -0.79
CHD1L-208ENST00000488864 AAMDCQ9H7C9 122 aa10.11□□□□□ -0.79
CHD1L-208ENST00000488864 LEPP41159 167 aa10.11□□□□□ -0.79
CHD1L-208ENST00000488864 ODF1Q14990 250 aa10.11□□□□□ -0.79
CHD1L-208ENST00000488864 ZNF502Q8TBZ5 544 aa10.11□□□□□ -0.79
CHD1L-208ENST00000488864 ZNF580Q9UK33 172 aa10.11□□□□□ -0.79
CHD1L-208ENST00000488864 TRBV12-3P01733 135 aa10.1□□□□□ -0.79
CHD1L-208ENST00000488864 EVI2AP22794 236 aa10.1□□□□□ -0.79
CHD1L-208ENST00000488864 PHLDA1Q8WV24 401 aaPredicted RBP10.1□□□□□ -0.79
CHD1L-208ENST00000488864 PRR25Q96S07 402 aa10.1□□□□□ -0.79
CHD1L-208ENST00000488864 CHAC1Q9BUX1 264 aa10.1□□□□□ -0.79
CHD1L-208ENST00000488864 ZMAT4Q9H898 229 aa10.1□□□□□ -0.79
CHD1L-208ENST00000488864 IGHV3OR16-8A0A075B7F1 116 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 FAM223BA6NKX1 122 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 GATA1P15976 413 aaPredicted RBP10.09□□□□□ -0.79
CHD1L-208ENST00000488864 HLA-DMBP28068 263 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 KHDC1LQ5JSQ8 128 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 GTSCR1Q86UQ5 136 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 FAM223AQ8IWN6 122 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 EEF1AKMT3Q96AZ1 226 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 VGLL1Q99990 258 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 H3BUA1 57 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 SMIM17P0DL12 118 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 KLK9Q2XQG4 91 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 SAMD13Q5VXD3 122 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 KLK9Q9UKQ9 250 aa10.09□□□□□ -0.79
CHD1L-208ENST00000488864 ZNF207O43670 478 aaKnown RBP10.08□□□□□ -0.8
CHD1L-208ENST00000488864 PRSS1P07477 247 aa10.08□□□□□ -0.8
CHD1L-208ENST00000488864 CTSGP08311 255 aa10.08□□□□□ -0.8
CHD1L-208ENST00000488864 TCTEX1D4Q5JR98 221 aa10.08□□□□□ -0.8
CHD1L-208ENST00000488864 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
CHD1L-208ENST00000488864 HIGD1BQ9P298 99 aa10.08□□□□□ -0.8
CHD1L-208ENST00000488864 FBLL1A6NHQ2 334 aaKnown RBP10.08□□□□□ -0.8
CHD1L-208ENST00000488864 FCER1GP30273 86 aa10.08□□□□□ -0.8
CHD1L-208ENST00000488864 C18orf65Q6ZTR6 163 aa10.08□□□□□ -0.8
CHD1L-208ENST00000488864 TMEM190Q8WZ59 177 aa10.08□□□□□ -0.8
CHD1L-208ENST00000488864 TRBV25-1A0A075B6N4 114 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 TRBV7-1A0A0A6YYK4 115 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 LINC01546A6NGU7 62 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 ELANEP08246 267 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 PDE6HQ13956 83 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 COX8CQ7Z4L0 72 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 USMG5Q96IX5 58 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 C16orf95Q9H693 158 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 NHP2Q9NX24 153 aaKnown RBP10.07□□□□□ -0.8
CHD1L-208ENST00000488864 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
CHD1L-208ENST00000488864 TNFRSF6BO95407 300 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 IGKCP01834 107 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 GTSF1LQ9H1H1 148 aa10.07□□□□□ -0.8
CHD1L-208ENST00000488864 BRI3O95415 125 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 ORM1P02763 201 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 AZU1P20160 251 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 WFDC2Q14508 124 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 MAPKAPK5-AS1Q8N8E1 139 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 SMAD5-AS1Q9Y6J3 95 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 WNK1Q9H4A3 2382 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 TENM1Q9UKZ4 2725 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 CIDEAO60543 219 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 CEND1Q8N111 149 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.06□□□□□ -0.8
CHD1L-208ENST00000488864 TMEM158Q8WZ71 300 aa10.06□□□□□ -0.8
CHD1L-208ENST00000488864 FBN1P35555 2871 aaKnown RBP10.05□□□□□ -0.8
CHD1L-208ENST00000488864 A0A1W2PRX2 142 aa10.05□□□□□ -0.8
CHD1L-208ENST00000488864 NDUFA7O95182 113 aa10.05□□□□□ -0.8
CHD1L-208ENST00000488864 CD28P10747 220 aa10.05□□□□□ -0.8
CHD1L-208ENST00000488864 ARL3P36405 182 aa10.05□□□□□ -0.8
CHD1L-208ENST00000488864 ERCC8Q13216 396 aa10.05□□□□□ -0.8
CHD1L-208ENST00000488864 DEFB136Q30KP8 78 aa10.05□□□□□ -0.8
CHD1L-208ENST00000488864 ZC2HC1BQ5TFG8 222 aa10.05□□□□□ -0.8
CHD1L-208ENST00000488864 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
CHD1L-208ENST00000488864 TMEM89A2RUT3 159 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 CLPSL1A2RUU4 121 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 IGLL5B9A064 214 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 E9PLD3 99 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 BMI1P35226 326 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 PROK1P58294 105 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 SMAGPQ0VAQ4 97 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 RNF152Q8N8N0 203 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 MYOZ3Q8TDC0 251 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 DUX3Q96PT4 197 aa10.04□□□□□ -0.8
CHD1L-208ENST00000488864 SPANXB1Q9NS25 103 aaPredicted RBP10.04□□□□□ -0.8
CHD1L-208ENST00000488864 TSSC4Q9Y5U2 329 aaPredicted RBP10.04□□□□□ -0.8
CHD1L-208ENST00000488864 DPM2O94777 84 aa10.03□□□□□ -0.8
CHD1L-208ENST00000488864 UBE2E2Q96LR5 201 aa10.03□□□□□ -0.8
CHD1L-208ENST00000488864 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
CHD1L-208ENST00000488864 NXT2Q9NPJ8 142 aaKnown RBP10.03□□□□□ -0.8
CHD1L-208ENST00000488864 IGLV2-18A0A075B6J9 118 aa10.03□□□□□ -0.8
CHD1L-208ENST00000488864 PRAC2D3DTV9 90 aa10.03□□□□□ -0.8
CHD1L-208ENST00000488864 SH2D6Q7Z4S9 175 aa10.03□□□□□ -0.8
CHD1L-208ENST00000488864 PRIMA1Q86XR5 153 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms