RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DEFA6Q01524 100 aa7.99□□□□□ -1.13
HDLBP-242ENST00000488013 DAZ2Q13117 558 aaKnown RBP7.99□□□□□ -1.13
HDLBP-242ENST00000488013 LGALS9BQ3B8N2 356 aa7.99□□□□□ -1.13
HDLBP-242ENST00000488013 RNASE8Q8TDE3 154 aaKnown RBP7.99□□□□□ -1.13
HDLBP-242ENST00000488013 TM2D3Q9BRN9 247 aa7.99□□□□□ -1.13
HDLBP-242ENST00000488013 OVOL2Q9BRP0 275 aa7.99□□□□□ -1.13
HDLBP-242ENST00000488013 CNFNQ9BYD5 112 aa7.99□□□□□ -1.13
HDLBP-242ENST00000488013 SCRT2Q9NQ03 307 aa7.99□□□□□ -1.13
HDLBP-242ENST00000488013 SMCO4Q9NRQ5 59 aa7.99□□□□□ -1.13
HDLBP-242ENST00000488013 PHLDA3Q9Y5J5 127 aa7.99□□□□□ -1.13
HDLBP-242ENST00000488013 TIMM8BQ9Y5J9 83 aaPredicted RBP7.99□□□□□ -1.13
HDLBP-242ENST00000488013 M0R2P5 195 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 GNRH2O43555 120 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 SNAI2O43623 268 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 ARMS2P0C7Q2 107 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 IGLC6P0CF74 106 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 CTRLP40313 264 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 RIGQ13278 110 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 ATP5L2Q7Z4Y8 100 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 SBSPONQ8IVN8 264 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 ZFP82Q8N141 532 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 C9orf85Q96MD7 179 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 X6R8D5 127 aa7.98□□□□□ -1.13
HDLBP-242ENST00000488013 DNAH3Q8TD57 4116 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 IGHV4-4A0A075B6R2 117 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 A0A1B0GUT8 65 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 GRIFINA4D1Z8 144 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 LYRM9A8MSI8 78 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 CIDEAO60543 219 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 COX19Q49B96 90 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 SPANXN1Q5VSR9 72 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 RASL11AQ6T310 242 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 Q6ZQT7 251 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 SMIM15Q7Z3B0 74 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 C11orf72Q8NBR9 251 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 GTSF1Q8WW33 167 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 TPPP3Q9BW30 176 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
HDLBP-242ENST00000488013 H3BVH4 76 aa7.96□□□□□ -1.14
HDLBP-242ENST00000488013 RNASE3P12724 160 aaKnown RBP7.96□□□□□ -1.14
HDLBP-242ENST00000488013 NUP35Q8NFH5 326 aa7.96□□□□□ -1.14
HDLBP-242ENST00000488013 RASL10AQ92737 203 aa7.96□□□□□ -1.14
HDLBP-242ENST00000488013 C11orf68Q9H3H3 251 aaKnown RBP7.96□□□□□ -1.14
HDLBP-242ENST00000488013 GSN-AS1Q9NRJ2 163 aa7.96□□□□□ -1.14
HDLBP-242ENST00000488013 IGHV4-28A0A0C4DH34 117 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 NXPH4O95158 308 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 TRGC1P0CF51 173 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 SPART-AS1P0CW21 52 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 GZMBP10144 247 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 AZU1P20160 251 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 ZNF876PQ49A33 203 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 LYZL1Q6UWQ5 148 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 ZNF575Q86XF7 245 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 Q8NAQ8 132 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 IL17DQ8TAD2 202 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 PGLYRP4Q96LB8 373 aa7.95□□□□□ -1.14
HDLBP-242ENST00000488013 AGRNO00468 2067 aa7.94□□□□□ -1.14
HDLBP-242ENST00000488013 TRBV24-1A0A075B6N3 115 aa7.94□□□□□ -1.14
HDLBP-242ENST00000488013 A8MWV9 139 aa7.94□□□□□ -1.14
HDLBP-242ENST00000488013 SPINK4O60575 86 aa7.94□□□□□ -1.14
HDLBP-242ENST00000488013 TWIST1Q15672 202 aa7.94□□□□□ -1.14
HDLBP-242ENST00000488013 C18orf15Q96N68 181 aa7.94□□□□□ -1.14
HDLBP-242ENST00000488013 AP1S3Q96PC3 154 aa7.94□□□□□ -1.14
HDLBP-242ENST00000488013 RHODO00212 210 aa7.93□□□□□ -1.14
HDLBP-242ENST00000488013 SMIM17P0DL12 118 aa7.93□□□□□ -1.14
HDLBP-242ENST00000488013 NTF3P20783 257 aa7.93□□□□□ -1.14
HDLBP-242ENST00000488013 FAM3BP58499 235 aaPredicted RBP7.93□□□□□ -1.14
HDLBP-242ENST00000488013 HBBP68871 147 aa7.93□□□□□ -1.14
HDLBP-242ENST00000488013 ATRAIDQ6UW56 229 aa7.93□□□□□ -1.14
HDLBP-242ENST00000488013 OR10AG1Q8NH19 301 aa7.93□□□□□ -1.14
HDLBP-242ENST00000488013 NOP10Q9NPE3 64 aaKnown RBP7.93□□□□□ -1.14
HDLBP-242ENST00000488013 TRGV1A0A0A0MS02 117 aa7.92□□□□□ -1.14
HDLBP-242ENST00000488013 PLAC8L1A1L4L8 177 aa7.92□□□□□ -1.14
HDLBP-242ENST00000488013 M0R381 172 aa7.92□□□□□ -1.14
HDLBP-242ENST00000488013 EMP1P54849 157 aa7.92□□□□□ -1.14
HDLBP-242ENST00000488013 FRZBQ92765 325 aa7.92□□□□□ -1.14
HDLBP-242ENST00000488013 DKK2Q9UBU2 259 aa7.92□□□□□ -1.14
HDLBP-242ENST00000488013 URGCP-MRPS24S4R325 110 aa7.92□□□□□ -1.14
HDLBP-242ENST00000488013 TRGV2A0A075B6R0 118 aa7.91□□□□□ -1.14
HDLBP-242ENST00000488013 MT-ND6P03923 174 aa7.91□□□□□ -1.14
HDLBP-242ENST00000488013 PRM2P04554 102 aa7.91□□□□□ -1.14
HDLBP-242ENST00000488013 ELOBQ15370 118 aa7.91□□□□□ -1.14
HDLBP-242ENST00000488013 TMEM88Q6PEY1 159 aa7.91□□□□□ -1.14
HDLBP-242ENST00000488013 ZFP2Q6ZN57 461 aa7.91□□□□□ -1.14
HDLBP-242ENST00000488013 LINC00612Q8N6U2 182 aa7.91□□□□□ -1.14
HDLBP-242ENST00000488013 TMEM191AQ9H0A3 160 aa7.91□□□□□ -1.14
HDLBP-242ENST00000488013 TRAV4A0A0B4J268 109 aa7.9□□□□□ -1.14
HDLBP-242ENST00000488013 A0A1B0GXF2 115 aa7.9□□□□□ -1.14
HDLBP-242ENST00000488013 SLAQ13239 276 aa7.9□□□□□ -1.14
HDLBP-242ENST00000488013 FAM222AQ5U5X8 452 aa7.9□□□□□ -1.14
HDLBP-242ENST00000488013 FAM210BQ96KR6 192 aa7.9□□□□□ -1.14
HDLBP-242ENST00000488013 GNB1LQ9BYB4 327 aa7.9□□□□□ -1.14
HDLBP-242ENST00000488013 RETNQ9HD89 108 aa7.9□□□□□ -1.14
HDLBP-242ENST00000488013 HLA-DQA1P01909 254 aa7.89□□□□□ -1.15
HDLBP-242ENST00000488013 CAMPP49913 170 aa7.89□□□□□ -1.15
HDLBP-242ENST00000488013 DAD1P61803 113 aa7.89□□□□□ -1.15
HDLBP-242ENST00000488013 MRPL54Q6P161 138 aaKnown RBP7.89□□□□□ -1.15
HDLBP-242ENST00000488013 Q6ZTI0 123 aa7.89□□□□□ -1.15
HDLBP-242ENST00000488013 CBLN2Q8IUK8 224 aa7.89□□□□□ -1.15
HDLBP-242ENST00000488013 GATD1Q8NB37 220 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms