RNA–Protein interactions for RNA: ENST00000487163.5

USP21-208, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 1 (best)

Gene USP21, Length 2,514 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-208ENST00000487163 HHLA3Q9XRX5 114 aa12.63□□□□□ -0.39
USP21-208ENST00000487163 IGKV2D-26A0A0A0MRZ7 120 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 K7EMT4 169 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 MGPP08493 103 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 APRG1Q8IVJ8 170 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 MRAP2Q96G30 205 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 KRTAP10-9P60411 292 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 UBE2V1Q13404 147 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 VAMP3Q15836 100 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 RASL10AQ92737 203 aa12.62□□□□□ -0.39
USP21-208ENST00000487163 COX6B1P14854 86 aa12.61□□□□□ -0.39
USP21-208ENST00000487163 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
USP21-208ENST00000487163 DPH3P1Q9H4G8 78 aa12.61□□□□□ -0.39
USP21-208ENST00000487163 ZMAT4Q9H898 229 aa12.61□□□□□ -0.39
USP21-208ENST00000487163 APCP25054 2843 aa12.61□□□□□ -0.39
USP21-208ENST00000487163 IGKV3-20P01619 116 aa12.61□□□□□ -0.39
USP21-208ENST00000487163 DUX5Q96PT3 197 aa12.61□□□□□ -0.39
USP21-208ENST00000487163 CR1P17927 2039 aa12.61□□□□□ -0.39
USP21-208ENST00000487163 IGKCP01834 107 aa12.6□□□□□ -0.39
USP21-208ENST00000487163 ZNF843Q8N446 348 aa12.6□□□□□ -0.39
USP21-208ENST00000487163 MYOZ3Q8TDC0 251 aa12.6□□□□□ -0.39
USP21-208ENST00000487163 TRAV12-3A0A0B4J271 114 aa12.6□□□□□ -0.39
USP21-208ENST00000487163 KLLNB2CW77 178 aa12.6□□□□□ -0.39
USP21-208ENST00000487163 ID1P41134 155 aa12.6□□□□□ -0.39
USP21-208ENST00000487163 SUMO2P61956 95 aaKnown RBP12.6□□□□□ -0.39
USP21-208ENST00000487163 TMEM160Q9NX00 188 aa12.6□□□□□ -0.39
USP21-208ENST00000487163 ZNF580Q9UK33 172 aa12.6□□□□□ -0.39
USP21-208ENST00000487163 CREBBPQ92793 2442 aa12.59□□□□□ -0.39
USP21-208ENST00000487163 SYNJ2BPP57105 145 aa12.59□□□□□ -0.39
USP21-208ENST00000487163 PSMG4Q5JS54 123 aa12.59□□□□□ -0.39
USP21-208ENST00000487163 GTSCR1Q86UQ5 136 aa12.59□□□□□ -0.39
USP21-208ENST00000487163 MRPL35Q9NZE8 188 aaKnown RBP12.59□□□□□ -0.39
USP21-208ENST00000487163 TENM4Q6N022 2769 aa12.59□□□□□ -0.39
USP21-208ENST00000487163 CHD6Q8TD26 2715 aa12.59□□□□□ -0.39
USP21-208ENST00000487163 ATP5LO75964 103 aa12.59□□□□□ -0.39
USP21-208ENST00000487163 BEX4Q9NWD9 120 aaPredicted RBP12.59□□□□□ -0.39
USP21-208ENST00000487163 ZC2HC1BQ5TFG8 222 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 FAM159AQ6UWV7 190 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 JPT2Q9H910 190 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 VPREB3Q9UKI3 123 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 TRAV12-2A0A075B6T6 113 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 TRBV7-9A0A0J9YWB2 115 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 J3QLI3 93 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 DEFB104AQ8WTQ1 72 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 CUBNO60494 3623 aa12.58□□□□□ -0.4
USP21-208ENST00000487163 DPM2O94777 84 aa12.57□□□□□ -0.4
USP21-208ENST00000487163 AP1S3Q96PC3 154 aa12.57□□□□□ -0.4
USP21-208ENST00000487163 CCDC168Q8NDH2 2452 aa12.57□□□□□ -0.4
USP21-208ENST00000487163 IGHV4OR15-8A0A075B7B6 117 aa12.57□□□□□ -0.4
USP21-208ENST00000487163 A0A087WW49 117 aa12.57□□□□□ -0.4
USP21-208ENST00000487163 ADAMTSL5Q6ZMM2 481 aa12.57□□□□□ -0.4
USP21-208ENST00000487163 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
USP21-208ENST00000487163 CD7P09564 240 aa12.56□□□□□ -0.4
USP21-208ENST00000487163 MED14OSP0DP75 135 aa12.56□□□□□ -0.4
USP21-208ENST00000487163 SONP18583 2426 aaKnown RBP12.56□□□□□ -0.4
USP21-208ENST00000487163 HOXA3O43365 443 aaPredicted RBP12.56□□□□□ -0.4
USP21-208ENST00000487163 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
USP21-208ENST00000487163 AMMECR1LQ6DCA0 310 aa12.56□□□□□ -0.4
USP21-208ENST00000487163 NEGR1Q7Z3B1 354 aa12.56□□□□□ -0.4
USP21-208ENST00000487163 TRAV8-6A0A0B4J262 113 aa12.55□□□□□ -0.4
USP21-208ENST00000487163 ZNF702PQ9H963 129 aa12.55□□□□□ -0.4
USP21-208ENST00000487163 Q6YL49 198 aa12.55□□□□□ -0.4
USP21-208ENST00000487163 A0A087WWL8 130 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.54□□□□□ -0.4
USP21-208ENST00000487163 SEC11AP67812 179 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 OR4C5Q8NGB2 326 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 C20orf78Q9BR46 151 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 MYO9AB2RTY4 2548 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 SIVA1O15304 175 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 HOXD3P31249 432 aaPredicted RBP12.54□□□□□ -0.4
USP21-208ENST00000487163 LINC00315P59091 139 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 HSD52Q0P140 79 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 KIF25-AS1Q9Y6Z4 181 aa12.54□□□□□ -0.4
USP21-208ENST00000487163 A0A087WX48 190 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 A0A0J9YX75 114 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 K7EQG2 157 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
USP21-208ENST00000487163 ORMDL2Q53FV1 153 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 SCGB3A1Q96QR1 104 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 TMEM89A2RUT3 159 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 FSHBP01225 129 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 SNRPD3P62318 126 aaKnown RBP12.53□□□□□ -0.4
USP21-208ENST00000487163 SPINK13Q1W4C9 94 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 DEFB136Q30KP8 78 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 C18orf65Q6ZTR6 163 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 NAA38Q9BRA0 125 aaKnown RBP12.53□□□□□ -0.4
USP21-208ENST00000487163 CSTL1Q9H114 145 aa12.53□□□□□ -0.4
USP21-208ENST00000487163 K7EP13 123 aa12.52□□□□□ -0.4
USP21-208ENST00000487163 NXPH4O95158 308 aa12.52□□□□□ -0.4
USP21-208ENST00000487163 MDFICQ9P1T7 246 aa12.52□□□□□ -0.4
USP21-208ENST00000487163 SAMD13Q5VXD3 122 aa12.52□□□□□ -0.41
USP21-208ENST00000487163 C2orf66Q6UXQ4 117 aa12.52□□□□□ -0.41
USP21-208ENST00000487163 TOMM6Q96B49 74 aa12.52□□□□□ -0.41
USP21-208ENST00000487163 NF1P21359 2839 aa12.51□□□□□ -0.41
USP21-208ENST00000487163 Q5PR19 223 aa12.51□□□□□ -0.41
USP21-208ENST00000487163 RBX1P62877 108 aa12.51□□□□□ -0.41
USP21-208ENST00000487163 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
USP21-208ENST00000487163 HIST2H2BDQ6DRA6 164 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms