RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CNFNQ9BYD5 112 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 CTDSP1Q9GZU7 261 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 TMEM242Q9NWH2 141 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 HIGD1CA8MV81 97 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 SNURFLB1AK76 121 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 DEFB4AO15263 64 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 SPINK4O60575 86 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 ATRAIDQ6UW56 229 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 PTH2Q96A98 100 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 SPXQ9BT56 116 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 NOP10Q9NPE3 64 aaKnown RBP6.84□□□□□ -1.31
MCF2L-227ENST00000486806 DKK2Q9UBU2 259 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 CELA1Q9UNI1 258 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 TIMM8BQ9Y5J9 83 aaPredicted RBP6.84□□□□□ -1.31
MCF2L-227ENST00000486806 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
MCF2L-227ENST00000486806 TENM3Q9P273 2699 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 IGHV4-4A0A075B6R2 117 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 A0A0J9YWU9 116 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 LYRM9A8MSI8 78 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 F2Z2F3 143 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 M0R2P5 195 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 EMP1P54849 157 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 LGALS9BQ3B8N2 356 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 PIK3CD-AS1Q5SR53 167 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 FAM222AQ5U5X8 452 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 OR10AG1Q8NH19 301 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 RASL10AQ92737 203 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 IMMP2LQ96T52 175 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 NDUFAF3Q9BU61 184 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 TPPP3Q9BW30 176 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 RPS10P5Q9NQ39 176 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 NAT8BQ9UHF3 227 aa6.83□□□□□ -1.32
MCF2L-227ENST00000486806 TEX48A0A1B0GUV7 120 aa6.82□□□□□ -1.32
MCF2L-227ENST00000486806 Q6ZTI0 123 aa6.82□□□□□ -1.32
MCF2L-227ENST00000486806 ZFP82Q8N141 532 aa6.82□□□□□ -1.32
MCF2L-227ENST00000486806 NUP35Q8NFH5 326 aa6.82□□□□□ -1.32
MCF2L-227ENST00000486806 C18orf15Q96N68 181 aa6.82□□□□□ -1.32
MCF2L-227ENST00000486806 EDA2RQ9HAV5 297 aa6.82□□□□□ -1.32
MCF2L-227ENST00000486806 MRPL16Q9NX20 251 aaKnown RBP6.82□□□□□ -1.32
MCF2L-227ENST00000486806 PHLDA3Q9Y5J5 127 aa6.82□□□□□ -1.32
MCF2L-227ENST00000486806 TRGV1A0A0A0MS02 117 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 MUC21A0A0G2JKD1 596 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 MUC21A0A140T8X8 626 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 M0R381 172 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 SPART-AS1P0CW21 52 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 S100A1P23297 94 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 CACNG7P62955 275 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 ZNF876PQ49A33 203 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 DMRTA1Q5VZB9 504 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 WDR73Q6P4I2 378 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 PGLYRP4Q96LB8 373 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 U3KQK5 164 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 DNAH7Q8WXX0 4024 aa6.81□□□□□ -1.32
MCF2L-227ENST00000486806 A0A1B0GXF2 115 aa6.8□□□□□ -1.32
MCF2L-227ENST00000486806 CXorf65A6NEN9 183 aa6.8□□□□□ -1.32
MCF2L-227ENST00000486806 FAM3BP58499 235 aaPredicted RBP6.8□□□□□ -1.32
MCF2L-227ENST00000486806 COL7A1Q02388 2944 aa6.8□□□□□ -1.32
MCF2L-227ENST00000486806 SPANXN1Q5VSR9 72 aa6.8□□□□□ -1.32
MCF2L-227ENST00000486806 SYT8Q8NBV8 401 aa6.8□□□□□ -1.32
MCF2L-227ENST00000486806 TRAV9-1A0A075B6T8 112 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 A0A1B0GUT8 65 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 GAGE12BA1L429 117 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 GAGE7O76087 117 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 GAGE12FP0CL80 117 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 GAGE12GP0CL81 117 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 GAGE12IP0CL82 117 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 NTF3P20783 257 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 C12orf74Q32Q52 190 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 UFSP1Q6NVU6 142 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 KCNIP4Q6PIL6 250 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 ATP5L2Q7Z4Y8 100 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 POM121L12Q8N7R1 296 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 YPEL4Q96NS1 127 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 MSRB1Q9NZV6 116 aa6.79□□□□□ -1.32
MCF2L-227ENST00000486806 DYNC2H1Q8NCM8 4307 aaKnown RBP6.78□□□□□ -1.32
MCF2L-227ENST00000486806 TRAV4A0A0B4J268 109 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 A8MWV9 139 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 RS1O15537 224 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 DEFB130BP0DP73 79 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 DEFB130AP0DP74 79 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 S100PP25815 95 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 DAD1P61803 113 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 CFAP126Q5VTH2 177 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
MCF2L-227ENST00000486806 CBLN2Q8IUK8 224 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 GATD1Q8NB37 220 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 C11orf45Q8TAV5 145 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 BORCS7Q96B45 105 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 BTF3L4Q96K17 158 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 AP1S3Q96PC3 154 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 SAMD10Q9BYL1 202 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 JPT2Q9H910 190 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 KIF25-AS1Q9Y6Z4 181 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 URGCP-MRPS24S4R325 110 aa6.78□□□□□ -1.32
MCF2L-227ENST00000486806 STAB2Q8WWQ8 2551 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 TRGV2A0A075B6R0 118 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 A0A1B0GW15 77 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 CRYGDP07320 174 aa6.77□□□□□ -1.33
MCF2L-227ENST00000486806 TRGC1P0CF51 173 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms