RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 SMIM7Q9BQ49 75 aa2.44□□□□□ -2.02
FXN-204ENST00000484259 RPP21Q9H633 154 aaKnown RBP2.44□□□□□ -2.02
FXN-204ENST00000484259 LTBP2Q14767 1821 aa2.44□□□□□ -2.02
FXN-204ENST00000484259 NCOR1O75376 2440 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 PATJQ8NI35 1801 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 MICAL3Q7RTP6 2002 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 A0A1W2PQD3 144 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 hDV103S1A0JD37 113 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 CD52P31358 61 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 PROK1P58294 105 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 RBM3P98179 157 aaKnown RBP2.43□□□□□ -2.02
FXN-204ENST00000484259 CYP2G1PQ6ZSU1 146 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 LINC00643Q86TS7 51 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 DYNAPQ8N1N2 210 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 RPRMLQ8N4K4 120 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 TET1Q8NFU7 2136 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 DYNLRB2Q8TF09 96 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 ODF3Q96PU9 254 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 SLC50A1Q9BRV3 221 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 SCRT1Q9BWW7 348 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 ZNF581Q9P0T4 197 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 ZNF580Q9UK33 172 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 TANC1Q9C0D5 1861 aa2.43□□□□□ -2.02
FXN-204ENST00000484259 TNRC6AQ8NDV7 1962 aaKnown RBP2.43□□□□□ -2.02
FXN-204ENST00000484259 MYLKQ15746 1914 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 SCN5AQ14524 2016 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 OBSL1O75147 1896 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 IGKV1D-17A0A075B6S4 117 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 TRAV13-2A0A0B4J235 113 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 TRAV3A0A0B4J244 114 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 TCRBV4S1A1TA0A5B7 111 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 A8MWP4 228 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 C5orf67F2Z3F1 127 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 GNRH2O43555 120 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 SH2D1AO60880 128 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 LY6HO94772 140 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 CPSF4O95639 269 aaKnown RBP2.42□□□□□ -2.02
FXN-204ENST00000484259 IGHV1-46P01743 117 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 RNASE2P10153 161 aaKnown RBP2.42□□□□□ -2.02
FXN-204ENST00000484259 LYZP61626 148 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 UBE2G1P62253 170 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 DEFB103AP81534 67 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 ZNF117Q03924 483 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 FHL2Q14192 279 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 ESRGQ1W209 222 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 RPL7L1Q6DKI1 246 aaKnown RBP2.42□□□□□ -2.02
FXN-204ENST00000484259 SDIM1Q6ZPB5 146 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 Q8N1X5 172 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 ZNF525Q8N782 197 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 C20orf203Q8NBC4 194 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 TMEM141Q96I45 108 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 SCRT2Q9NQ03 307 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 TRAPPC1Q9Y5R8 145 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 SCN2AQ99250 2005 aa2.42□□□□□ -2.02
FXN-204ENST00000484259 PRRC2BQ5JSZ5 2229 aaKnown RBP2.41□□□□□ -2.02
FXN-204ENST00000484259 CROCCQ5TZA2 2017 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 IGLV7-46A0A075B6I9 117 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 FXYD6-FXYD2A0A087WZ82 144 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 IGHV1-3A0A0C4DH29 117 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 A0A1B0GVX0 72 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 A6NED7 52 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 SOCS2O14508 198 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 LECT2O14960 151 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 IGKV1D-33P01593 117 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 IGKV1-33P01594 117 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 COX8AP10176 69 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 CD24P25063 80 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 SUPT4H1P63272 117 aaKnown RBP2.41□□□□□ -2.02
FXN-204ENST00000484259 KLKP1Q107X0 134 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 PYDC2Q56P42 97 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 LINC00269Q8N2A0 174 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 TIMM21Q9BVV7 248 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 CYP4F30PQ9H0H9 118 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 FXYD6Q9H0Q3 95 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 FGF22Q9HCT0 170 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 DYNLRB1Q9NP97 96 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 HIGD1BQ9P298 99 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 SMAD5-AS1Q9Y6J3 95 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 COL4A6Q14031 1691 aa2.41□□□□□ -2.02
FXN-204ENST00000484259 CHD3Q12873 2000 aaKnown RBP2.41□□□□□ -2.02
FXN-204ENST00000484259 PLXNB3Q9ULL4 1909 aa2.4□□□□□ -2.02
FXN-204ENST00000484259 HTTP42858 3142 aa2.4□□□□□ -2.02
FXN-204ENST00000484259 BRWD1Q9NSI6 2320 aa2.4□□□□□ -2.02
FXN-204ENST00000484259 MYO7AQ13402 2215 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 GBF1Q92538 1859 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 A6NDX4 124 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 A6NIN4 97 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 RPL28P46779 137 aaKnown RBP2.4□□□□□ -2.03
FXN-204ENST00000484259 XCL1P47992 114 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 LINC01547P58512 204 aaPredicted RBP2.4□□□□□ -2.03
FXN-204ENST00000484259 ZNF816Q0VGE8 651 aaPredicted RBP2.4□□□□□ -2.03
FXN-204ENST00000484259 IL17AQ16552 155 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 C2orf83Q53S99 150 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 S100A7L2Q5SY68 101 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 Q6P435 159 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 Q8N814 137 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 Q8N9W7 124 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 SIP14410 1827 aa2.4□□□□□ -2.03
FXN-204ENST00000484259 PTPRBP23467 1997 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms