RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 HIST1H2BCP62807 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 EGFEM1PQ0D2K5 195 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 SLAQ13239 276 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST2H2BEQ16778 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-226ENST00000483656 CSNK1G2-AS1Q8NCQ2 148 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST1H2BHQ93079 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 C9orf85Q96MD7 179 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST1H2BNQ99877 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HIST1H2BMQ99879 126 aa7.35□□□□□ -1.23
HDAC6-226ENST00000483656 TIMM8BQ9Y5J9 83 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-226ENST00000483656 HLA-DQA1P01909 254 aa7.34□□□□□ -1.23
HDAC6-226ENST00000483656 APCSP02743 223 aa7.34□□□□□ -1.23
HDAC6-226ENST00000483656 MT-ND6P03923 174 aa7.34□□□□□ -1.23
HDAC6-226ENST00000483656 S100A4P26447 101 aaKnown RBP7.34□□□□□ -1.23
HDAC6-226ENST00000483656 KIAA1644Q3SXP7 199 aa7.34□□□□□ -1.23
HDAC6-226ENST00000483656 MORN3Q6PF18 240 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-226ENST00000483656 ZNF493Q6ZR52 646 aa7.34□□□□□ -1.23
HDAC6-226ENST00000483656 BORCS7Q96B45 105 aa7.34□□□□□ -1.23
HDAC6-226ENST00000483656 LINC01587Q99440 93 aa7.34□□□□□ -1.23
HDAC6-226ENST00000483656 G3V4G9 280 aa7.33□□□□□ -1.24
HDAC6-226ENST00000483656 NXPH4O95158 308 aa7.33□□□□□ -1.24
HDAC6-226ENST00000483656 AZU1P20160 251 aa7.33□□□□□ -1.24
HDAC6-226ENST00000483656 NUTF2P61970 127 aaKnown RBP7.33□□□□□ -1.24
HDAC6-226ENST00000483656 CACNG7P62955 275 aa7.33□□□□□ -1.24
HDAC6-226ENST00000483656 TWIST1Q15672 202 aa7.33□□□□□ -1.24
HDAC6-226ENST00000483656 MUC4Q99102 2169 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 TRGV11A0A075B6L2 103 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 CBY3A6NI87 242 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 S100A8P05109 93 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 SAMD5Q5TGI4 173 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 FAM104BQ5XKR9 115 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 TMEM256Q8N2U0 113 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 C11orf72Q8NBR9 251 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 RNF185Q96GF1 192 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 CSTL1Q9H114 145 aa7.32□□□□□ -1.24
HDAC6-226ENST00000483656 LOC102724200A0A096LPH7 203 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-226ENST00000483656 M0R381 172 aa7.31□□□□□ -1.24
HDAC6-226ENST00000483656 HTN1P15515 57 aa7.31□□□□□ -1.24
HDAC6-226ENST00000483656 SPANXN1Q5VSR9 72 aa7.31□□□□□ -1.24
HDAC6-226ENST00000483656 ZNF705AQ6ZN79 300 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-226ENST00000483656 AMN1Q8IY45 258 aa7.31□□□□□ -1.24
HDAC6-226ENST00000483656 ALKBH7Q9BT30 221 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-226ENST00000483656 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
HDAC6-226ENST00000483656 IGHV3OR16-12A0A075B7B8 117 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 IGHV4-30-4P0DP06 118 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 RAB4AP20338 218 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 EVI2AP22794 236 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 SRIP30626 198 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 NDUFA6P56556 154 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 MRPL51Q4U2R6 128 aaKnown RBP7.3□□□□□ -1.24
HDAC6-226ENST00000483656 IL17DQ8TAD2 202 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 TMEM208Q9BTX3 173 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 C1QTNF4Q9BXJ3 329 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 JPT2Q9H910 190 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 GSN-AS1Q9NRJ2 163 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 GOLT1BQ9Y3E0 138 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 KIF25-AS1Q9Y6Z4 181 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 U3KQK5 164 aa7.3□□□□□ -1.24
HDAC6-226ENST00000483656 KIR2DL5BA0A0G2JN68 375 aa7.29□□□□□ -1.24
HDAC6-226ENST00000483656 KIR2DL5BA0A0G2JPC4 375 aa7.29□□□□□ -1.24
HDAC6-226ENST00000483656 C5orf52A6NGY3 159 aa7.29□□□□□ -1.24
HDAC6-226ENST00000483656 GAS8-AS1O95177 125 aa7.29□□□□□ -1.24
HDAC6-226ENST00000483656 LINC00315P59091 139 aa7.29□□□□□ -1.24
HDAC6-226ENST00000483656 ZNF415Q09FC8 603 aa7.29□□□□□ -1.24
HDAC6-226ENST00000483656 COA6Q5JTJ3 125 aaKnown RBP7.29□□□□□ -1.24
HDAC6-226ENST00000483656 KIR2DL5AQ8N109 375 aa7.29□□□□□ -1.24
HDAC6-226ENST00000483656 KIR2DL5BQ8NHK3 375 aa7.29□□□□□ -1.24
HDAC6-226ENST00000483656 RNASE8Q8TDE3 154 aaKnown RBP7.29□□□□□ -1.24
HDAC6-226ENST00000483656 LOC105371267A0A1B0GV96 52 aa7.28□□□□□ -1.24
HDAC6-226ENST00000483656 PLAC8L1A1L4L8 177 aa7.28□□□□□ -1.24
HDAC6-226ENST00000483656 LINC00310P59036 64 aa7.28□□□□□ -1.24
HDAC6-226ENST00000483656 SNRPEP62304 92 aaKnown RBP7.28□□□□□ -1.24
HDAC6-226ENST00000483656 Q0VG73 95 aa7.28□□□□□ -1.24
HDAC6-226ENST00000483656 C14orf178Q8N769 122 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-226ENST00000483656 PTH2Q96A98 100 aa7.28□□□□□ -1.24
HDAC6-226ENST00000483656 RCHY1Q96PM5 261 aa7.28□□□□□ -1.24
HDAC6-226ENST00000483656 A8MZ25 164 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 SMKR1H3BMG3 65 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 M0R2P5 195 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 NUPR1O60356 82 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 CRYGDP07320 174 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 HOXA5P20719 270 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 IQCJQ1A5X6 159 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 ZNF876PQ49A33 203 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 POM121L12Q8N7R1 296 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 SYT8Q8NBV8 401 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 C18orf32Q8TCD1 76 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 SPXQ9BT56 116 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 SAMD10Q9BYL1 202 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 ZMAT5Q9UDW3 170 aaKnown RBP7.27□□□□□ -1.25
HDAC6-226ENST00000483656 X6R8D5 127 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 NBEAL2Q6ZNJ1 2754 aa7.27□□□□□ -1.25
HDAC6-226ENST00000483656 D6R8Y8 96 aa7.26□□□□□ -1.25
HDAC6-226ENST00000483656 NCR2O95944 276 aa7.26□□□□□ -1.25
HDAC6-226ENST00000483656 S100A6P06703 90 aa7.26□□□□□ -1.25
HDAC6-226ENST00000483656 GATA1P15976 413 aaPredicted RBP7.26□□□□□ -1.25
HDAC6-226ENST00000483656 APOC4P55056 127 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms