RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
SEC13-216ENST00000479868 K7EQG2 157 aa9.73□□□□□ -0.85
SEC13-216ENST00000479868 RNASE3P12724 160 aaKnown RBP9.73□□□□□ -0.85
SEC13-216ENST00000479868 GAGE1Q13065 139 aa9.73□□□□□ -0.85
SEC13-216ENST00000479868 CLUHP3Q96NS8 147 aa9.73□□□□□ -0.85
SEC13-216ENST00000479868 NXT2Q9NPJ8 142 aaKnown RBP9.73□□□□□ -0.85
SEC13-216ENST00000479868 SCRT2Q9NQ03 307 aa9.73□□□□□ -0.85
SEC13-216ENST00000479868 PDZD2O15018 2839 aa9.73□□□□□ -0.85
SEC13-216ENST00000479868 PHLDA3Q9Y5J5 127 aa9.73□□□□□ -0.85
SEC13-216ENST00000479868 NF1P21359 2839 aa9.73□□□□□ -0.85
SEC13-216ENST00000479868 LEPP41159 167 aa9.72□□□□□ -0.85
SEC13-216ENST00000479868 ADAMTSL5Q6ZMM2 481 aa9.72□□□□□ -0.85
SEC13-216ENST00000479868 KMT2BQ9UMN6 2715 aaPredicted RBP9.72□□□□□ -0.85
SEC13-216ENST00000479868 HELZ2Q9BYK8 2649 aaKnown RBP9.72□□□□□ -0.85
SEC13-216ENST00000479868 A0A0J9YX75 114 aa9.72□□□□□ -0.85
SEC13-216ENST00000479868 SLURP1P55000 103 aa9.72□□□□□ -0.85
SEC13-216ENST00000479868 SNRPD3P62318 126 aaKnown RBP9.72□□□□□ -0.85
SEC13-216ENST00000479868 Q8N8P6 123 aa9.72□□□□□ -0.85
SEC13-216ENST00000479868 IFI27L1Q96BM0 104 aa9.72□□□□□ -0.85
SEC13-216ENST00000479868 ITPR2Q14571 2701 aa9.71□□□□□ -0.85
SEC13-216ENST00000479868 IGKV3-20P01619 116 aa9.71□□□□□ -0.85
SEC13-216ENST00000479868 MED14OSP0DP75 135 aa9.71□□□□□ -0.85
SEC13-216ENST00000479868 HIST2H2BDQ6DRA6 164 aa9.71□□□□□ -0.85
SEC13-216ENST00000479868 C14orf178Q8N769 122 aaPredicted RBP9.71□□□□□ -0.85
SEC13-216ENST00000479868 C18orf15Q96N68 181 aa9.71□□□□□ -0.85
SEC13-216ENST00000479868 MRPS16Q9Y3D3 137 aaKnown RBP9.71□□□□□ -0.85
SEC13-216ENST00000479868 TRAV12-3A0A0B4J271 114 aa9.71□□□□□ -0.86
SEC13-216ENST00000479868 FCER1GP30273 86 aa9.71□□□□□ -0.86
SEC13-216ENST00000479868 TCTEX1D4Q5JR98 221 aa9.71□□□□□ -0.86
SEC13-216ENST00000479868 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 LGALS9CQ6DKI2 356 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 DLEU1O43261 78 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 FAM159AQ6UWV7 190 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 DEFB125Q8N687 156 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 TMEM158Q8WZ71 300 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 MRAP2Q96G30 205 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 DUX3Q96PT4 197 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 DPH3P1Q9H4G8 78 aa9.7□□□□□ -0.86
SEC13-216ENST00000479868 ACANP16112 2415 aa9.69□□□□□ -0.86
SEC13-216ENST00000479868 C7orf71A4D174 169 aa9.69□□□□□ -0.86
SEC13-216ENST00000479868 RBX1P62877 108 aa9.69□□□□□ -0.86
SEC13-216ENST00000479868 STPG4Q8N801 248 aa9.69□□□□□ -0.86
SEC13-216ENST00000479868 OR11H1Q8NG94 326 aa9.69□□□□□ -0.86
SEC13-216ENST00000479868 CD5LO43866 347 aa9.68□□□□□ -0.86
SEC13-216ENST00000479868 PLA2G2AP14555 144 aa9.68□□□□□ -0.86
SEC13-216ENST00000479868 HINT1P49773 126 aaPredicted RBP9.68□□□□□ -0.86
SEC13-216ENST00000479868 RASL10AQ92737 203 aa9.68□□□□□ -0.86
SEC13-216ENST00000479868 ODF3Q96PU9 254 aa9.68□□□□□ -0.86
SEC13-216ENST00000479868 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
SEC13-216ENST00000479868 SLC25A34Q6PIV7 304 aa9.68□□□□□ -0.86
SEC13-216ENST00000479868 LINC01619G3V211 115 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 NXPH4O95158 308 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 MGPP08493 103 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 CD7P09564 240 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 ZNF25P17030 456 aaPredicted RBP9.67□□□□□ -0.86
SEC13-216ENST00000479868 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 Q6ZSV7 163 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 RPL39LQ96EH5 51 aaKnown RBP9.67□□□□□ -0.86
SEC13-216ENST00000479868 DKK2Q9UBU2 259 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 DNAJC9-AS1A6NH13 148 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 CDKN1BP46527 198 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 LAGE3Q14657 143 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 COL5A1-AS1Q5SY13 56 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 TMEM86BQ8N661 226 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 C4orf3Q8WVX3 66 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
SEC13-216ENST00000479868 DPF1Q92782 380 aa9.66□□□□□ -0.86
SEC13-216ENST00000479868 SMIM2Q9BVW6 85 aa9.66□□□□□ -0.86
SEC13-216ENST00000479868 JPT2Q9H910 190 aa9.66□□□□□ -0.86
SEC13-216ENST00000479868 SMIM17P0DL12 118 aa9.66□□□□□ -0.86
SEC13-216ENST00000479868 ESM1Q9NQ30 184 aa9.66□□□□□ -0.86
SEC13-216ENST00000479868 J3QKU1 62 aa9.65□□□□□ -0.86
SEC13-216ENST00000479868 TCTAP57738 103 aa9.65□□□□□ -0.86
SEC13-216ENST00000479868 SUMO2P61956 95 aaKnown RBP9.65□□□□□ -0.86
SEC13-216ENST00000479868 FOXI2Q6ZQN5 318 aa9.65□□□□□ -0.86
SEC13-216ENST00000479868 KLHL30-AS1Q8NEE0 82 aa9.65□□□□□ -0.86
SEC13-216ENST00000479868 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.86
SEC13-216ENST00000479868 KIF25-AS1Q9Y6Z4 181 aa9.65□□□□□ -0.86
SEC13-216ENST00000479868 UNC79Q9P2D8 2635 aa9.65□□□□□ -0.86
SEC13-216ENST00000479868 COX8AP10176 69 aa9.65□□□□□ -0.87
SEC13-216ENST00000479868 LINC00315P59091 139 aa9.65□□□□□ -0.87
SEC13-216ENST00000479868 KRTAP1-1Q07627 177 aa9.65□□□□□ -0.87
SEC13-216ENST00000479868 AMTNQ6UX39 209 aa9.65□□□□□ -0.87
SEC13-216ENST00000479868 OR9G4Q8NGQ1 327 aa9.65□□□□□ -0.87
SEC13-216ENST00000479868 DLX4Q92988 240 aaPredicted RBP9.65□□□□□ -0.87
SEC13-216ENST00000479868 TMEM208Q9BTX3 173 aa9.65□□□□□ -0.87
SEC13-216ENST00000479868 MDFICQ9P1T7 246 aa9.65□□□□□ -0.87
SEC13-216ENST00000479868 PRSS1P07477 247 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 Q8N1Y9 231 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 MTORP42345 2549 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 IGHV3-16A0A0C4DH30 117 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 KNCNA6PVL3 124 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 DUSP14O95147 198 aaKnown RBP9.64□□□□□ -0.87
SEC13-216ENST00000479868 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 TEX29Q8N6K0 151 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
SEC13-216ENST00000479868 SETD2Q9BYW2 2564 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms