RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	LY96	Q9Y6Y9	160 aa		10.19	□□□□□ -0.78
CCNL1-222	ENST00000479596	IGHV3-73	A0A0B4J1V6	119 aa		10.18	□□□□□ -0.78
CCNL1-222	ENST00000479596	TIRAP	P58753	221 aa		10.18	□□□□□ -0.78
CCNL1-222	ENST00000479596	COX8C	Q7Z4L0	72 aa		10.18	□□□□□ -0.78
CCNL1-222	ENST00000479596	ZC2HC1A	Q96GY0	325 aa		10.18	□□□□□ -0.78
CCNL1-222	ENST00000479596	NKX6-2	Q9C056	277 aa	Predicted RBP	10.18	□□□□□ -0.78
CCNL1-222	ENST00000479596	PPT1	P50897	306 aa		10.17	□□□□□ -0.78
CCNL1-222	ENST00000479596		Q6ZSN1	163 aa		10.17	□□□□□ -0.78
CCNL1-222	ENST00000479596	TRBV6-4	A0A1B0GX49	114 aa		10.16	□□□□□ -0.78
CCNL1-222	ENST00000479596	HMSD	A8MTL9	139 aa		10.16	□□□□□ -0.78
CCNL1-222	ENST00000479596	FABP5P3	A8MUU1	101 aa		10.16	□□□□□ -0.78
CCNL1-222	ENST00000479596	CIDEA	O60543	219 aa		10.16	□□□□□ -0.78
CCNL1-222	ENST00000479596	RHOH	Q15669	191 aa		10.16	□□□□□ -0.78
CCNL1-222	ENST00000479596	SH2D6	Q7Z4S9	175 aa		10.16	□□□□□ -0.78
CCNL1-222	ENST00000479596	NHLRC2	Q8NBF2	726 aa		10.16	□□□□□ -0.78
CCNL1-222	ENST00000479596	TRBV6-1	A0A0K0K1D8	114 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	KRBOX1	C9JBD0	128 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596		K7EP13	123 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	SH2D1A	O60880	128 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	SEC11B	P0C7V7	166 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	ASIP	P42127	132 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	UFSP1	Q6NVU6	142 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	FMC1	Q96HJ9	113 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	PARL	Q9H300	379 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	MSRB1	Q9NZV6	116 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	ZFP30	Q9Y2G7	519 aa		10.15	□□□□□ -0.78
CCNL1-222	ENST00000479596	TRAV9-2	A0A087WT02	112 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596		B4DEV8	164 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596		H3BVH4	76 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	BCL2L11	O43521	198 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	LTA	P01374	205 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	LINC00694	P0DN24	101 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	EVI2A	P22794	236 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	FUS	P35637	526 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	PIK3CD-AS1	Q5SR53	167 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	DNLZ	Q5SXM8	178 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	NFE4	Q86UQ8	179 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	MBD3L1	Q8WWY6	194 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	TCEAL7	Q9BRU2	100 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	PRADC1	Q9BSG0	188 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	JPT2	Q9H910	190 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596	IL36B	Q9NZH7	164 aa		10.14	□□□□□ -0.79
CCNL1-222	ENST00000479596		M0R036	132 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	PAGE4	O60829	102 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	CRYGD	P07320	174 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	MGST1	P10620	155 aa	Known RBP	10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	S100A4	P26447	101 aa	Known RBP	10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	UBE2G1	P62253	170 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	ZNF674	Q2M3X9	581 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	FAM162B	Q5T6X4	162 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	CST9LP1	Q5W188	147 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	ZFP2	Q6ZN57	461 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	STOML3	Q8TAV4	291 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	FAM213B	Q8TBF2	198 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596	SAMD10	Q9BYL1	202 aa		10.13	□□□□□ -0.79
CCNL1-222	ENST00000479596		A0A087WTM6	91 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	IGHV3-38	A0A0C4DH36	116 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596		A0A0D9SG52	128 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596		A0A1B0GV50	99 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	GRIFIN	A4D1Z8	144 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596		A8MWV9	139 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	UMAD1	C9J7I0	102 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	ERVFC1-1	P60608	527 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	LINC01556	Q5JQF7	62 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	DMRTA1	Q5VZB9	504 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	SFT2D1	Q8WV19	159 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	ZNF471	Q9BX82	626 aa	Predicted RBP	10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	SCRT2	Q9NQ03	307 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596		Q9UF83	564 aa		10.12	□□□□□ -0.79
CCNL1-222	ENST00000479596	ARMS2	P0C7Q2	107 aa		10.11	□□□□□ -0.79
CCNL1-222	ENST00000479596	AKR1C3	P42330	323 aa		10.11	□□□□□ -0.79
CCNL1-222	ENST00000479596	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.11	□□□□□ -0.79
CCNL1-222	ENST00000479596	LINC01559	Q495D7	138 aa		10.11	□□□□□ -0.79
CCNL1-222	ENST00000479596	LELP1	Q5T871	98 aa		10.11	□□□□□ -0.79
CCNL1-222	ENST00000479596	C10orf126	Q8N4M7	172 aa		10.11	□□□□□ -0.79
CCNL1-222	ENST00000479596	MAPKAPK5-AS1	Q8N8E1	139 aa		10.11	□□□□□ -0.79
CCNL1-222	ENST00000479596	KANTR	A0A1W2PQU2	76 aa		10.1	□□□□□ -0.79
CCNL1-222	ENST00000479596	C14orf178	Q8N769	122 aa	Predicted RBP	10.1	□□□□□ -0.79
CCNL1-222	ENST00000479596	GTSF1L	Q9H1H1	148 aa		10.1	□□□□□ -0.79
CCNL1-222	ENST00000479596	TMSB15B	A0A087X1C1	80 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	TRAV8-6	A0A0B4J262	113 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	SCO2	A0A1W2PP80	73 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	OR10J3	Q5JRS4	329 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	TMUB2	Q71RG4	321 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	ATP6V0E2	Q8NHE4	81 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	MLST8	Q9BVC4	326 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	PGPEP1	Q9NXJ5	209 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	DNAH8	Q96JB1	4490 aa		10.09	□□□□□ -0.79
CCNL1-222	ENST00000479596	GAGE12J	A6NER3	117 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	IBA57-AS1	B1ANH7	110 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	GAGE1	Q13065	139 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	GAGE4	Q13068	117 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	GAGE5	Q13069	117 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	GAGE13	Q4V321	117 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	LCE2D	Q5TA82	110 aa	Predicted RBP	10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596		Q8N3U1	123 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	SFRP2	Q96HF1	295 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	FAT1	Q14517	4588 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	VPS13B	Q7Z7G8	4022 aa		10.08	□□□□□ -0.8
CCNL1-222	ENST00000479596	EREG	O14944	169 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms