RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 A0A087WX48 190 aa10.42□□□□□ -0.74
DDX56-210ENST00000479440 PGPEP1LA6NFU8 196 aa10.42□□□□□ -0.74
DDX56-210ENST00000479440 A8MWV9 139 aa10.42□□□□□ -0.74
DDX56-210ENST00000479440 NIT1Q86X76 327 aa10.42□□□□□ -0.74
DDX56-210ENST00000479440 TVP23CQ96ET8 276 aa10.42□□□□□ -0.74
DDX56-210ENST00000479440 SEC22CQ9BRL7 303 aa10.42□□□□□ -0.74
DDX56-210ENST00000479440 TAAR5O14804 337 aa10.41□□□□□ -0.74
DDX56-210ENST00000479440 NHLH2Q02577 135 aa10.41□□□□□ -0.74
DDX56-210ENST00000479440 Q0VG73 95 aa10.41□□□□□ -0.74
DDX56-210ENST00000479440 ATRAIDQ6UW56 229 aa10.41□□□□□ -0.74
DDX56-210ENST00000479440 DNAJC30Q96LL9 226 aa10.41□□□□□ -0.74
DDX56-210ENST00000479440 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
DDX56-210ENST00000479440 CCDC160A6NGH7 325 aa10.4□□□□□ -0.74
DDX56-210ENST00000479440 IL15RAQ13261 267 aa10.4□□□□□ -0.74
DDX56-210ENST00000479440 ZFP69Q49AA0 526 aa10.4□□□□□ -0.74
DDX56-210ENST00000479440 FFAR4Q5NUL3 377 aa10.4□□□□□ -0.74
DDX56-210ENST00000479440 MBD2Q9UBB5 411 aa10.4□□□□□ -0.74
DDX56-210ENST00000479440 SERTM2A0A1B0GWG4 89 aa10.39□□□□□ -0.75
DDX56-210ENST00000479440 IL7P13232 177 aa10.39□□□□□ -0.75
DDX56-210ENST00000479440 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
DDX56-210ENST00000479440 LINC00479Q96M42 142 aa10.39□□□□□ -0.75
DDX56-210ENST00000479440 TRAV6A0A075B6T7 132 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 A0A0D9SG52 128 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 CRPP02741 224 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 TCRBP04435 133 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 RNASE3P12724 160 aaKnown RBP10.38□□□□□ -0.75
DDX56-210ENST00000479440 GNG5P63218 68 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 LGALSLQ3ZCW2 172 aaPredicted RBP10.38□□□□□ -0.75
DDX56-210ENST00000479440 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 TMEM75Q8N9X5 138 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 OR2T35Q8NGX2 323 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 SAMD10Q9BYL1 202 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 NUDT15Q9NV35 164 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 OR5AC2Q9NZP5 309 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 C11orf21Q9P2W6 132 aa10.38□□□□□ -0.75
DDX56-210ENST00000479440 LRP2P98164 4655 aa10.37□□□□□ -0.75
DDX56-210ENST00000479440 GCGP01275 180 aa10.37□□□□□ -0.75
DDX56-210ENST00000479440 S100A4P26447 101 aaKnown RBP10.37□□□□□ -0.75
DDX56-210ENST00000479440 PQLC2Q6ZP29 291 aa10.37□□□□□ -0.75
DDX56-210ENST00000479440 HSD17B11Q8NBQ5 300 aa10.37□□□□□ -0.75
DDX56-210ENST00000479440 ZC2HC1AQ96GY0 325 aa10.37□□□□□ -0.75
DDX56-210ENST00000479440 SDHCQ99643 169 aaPredicted RBP10.37□□□□□ -0.75
DDX56-210ENST00000479440 K7EQM0 130 aa10.36□□□□□ -0.75
DDX56-210ENST00000479440 RHODO00212 210 aa10.36□□□□□ -0.75
DDX56-210ENST00000479440 LYRM1O43325 122 aa10.36□□□□□ -0.75
DDX56-210ENST00000479440 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
DDX56-210ENST00000479440 C14orf178Q8N769 122 aaPredicted RBP10.36□□□□□ -0.75
DDX56-210ENST00000479440 TNXBP22105 4242 aa10.35□□□□□ -0.75
DDX56-210ENST00000479440 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
DDX56-210ENST00000479440 SMUG1Q53HV7 270 aa10.35□□□□□ -0.75
DDX56-210ENST00000479440 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
DDX56-210ENST00000479440 SGK494Q96LW2 274 aa10.35□□□□□ -0.75
DDX56-210ENST00000479440 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
DDX56-210ENST00000479440 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
DDX56-210ENST00000479440 C9orf163Q8N9P6 203 aa10.34□□□□□ -0.75
DDX56-210ENST00000479440 OR10G7Q8NGN6 311 aa10.34□□□□□ -0.75
DDX56-210ENST00000479440 OR2G3Q8NGZ4 309 aa10.34□□□□□ -0.75
DDX56-210ENST00000479440 DPH3P1Q9H4G8 78 aa10.34□□□□□ -0.75
DDX56-210ENST00000479440 Q9UF83 564 aa10.34□□□□□ -0.75
DDX56-210ENST00000479440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
DDX56-210ENST00000479440 A0A1W2PPV4 95 aa10.33□□□□□ -0.76
DDX56-210ENST00000479440 PLA2G10O15496 165 aa10.33□□□□□ -0.76
DDX56-210ENST00000479440 EIF3GO75821 320 aaKnown RBP eCLIP10.33□□□□□ -0.76
DDX56-210ENST00000479440 ASIPP42127 132 aa10.33□□□□□ -0.76
DDX56-210ENST00000479440 RPL19P84098 196 aaKnown RBP10.33□□□□□ -0.76
DDX56-210ENST00000479440 LRRC37A5PQ49AS3 106 aa10.33□□□□□ -0.76
DDX56-210ENST00000479440 C5orf17Q8NAS9 161 aa10.33□□□□□ -0.76
DDX56-210ENST00000479440 PSG8Q9UQ74 426 aa10.33□□□□□ -0.76
DDX56-210ENST00000479440 TCRAP04437 139 aa10.32□□□□□ -0.76
DDX56-210ENST00000479440 H2AFB2P0C5Z0 115 aa10.32□□□□□ -0.76
DDX56-210ENST00000479440 SCGB1C1Q8TD33 95 aa10.32□□□□□ -0.76
DDX56-210ENST00000479440 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
DDX56-210ENST00000479440 FAM74A4Q5TZK3 123 aa10.31□□□□□ -0.76
DDX56-210ENST00000479440 ENHOQ6UWT2 76 aa10.31□□□□□ -0.76
DDX56-210ENST00000479440 PRSS1P07477 247 aa10.3□□□□□ -0.76
DDX56-210ENST00000479440 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
DDX56-210ENST00000479440 FLI1Q01543 452 aaPredicted RBP10.3□□□□□ -0.76
DDX56-210ENST00000479440 C15orf54Q8N8G6 183 aa10.3□□□□□ -0.76
DDX56-210ENST00000479440 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
DDX56-210ENST00000479440 JPT2Q9H910 190 aa10.3□□□□□ -0.76
DDX56-210ENST00000479440 IL36BQ9NZH7 164 aa10.3□□□□□ -0.76
DDX56-210ENST00000479440 IGKV3D-20A0A0C4DH25 116 aa10.29□□□□□ -0.76
DDX56-210ENST00000479440 TRBV10-1A0A0K0K1A3 114 aa10.29□□□□□ -0.76
DDX56-210ENST00000479440 PANO1I0J062 215 aa10.29□□□□□ -0.76
DDX56-210ENST00000479440 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
DDX56-210ENST00000479440 PKIAP61925 76 aa10.29□□□□□ -0.76
DDX56-210ENST00000479440 MIAQ16674 131 aa10.29□□□□□ -0.76
DDX56-210ENST00000479440 SAPCD1Q5SSQ6 148 aa10.29□□□□□ -0.76
DDX56-210ENST00000479440 PRNTQ86SH4 94 aa10.29□□□□□ -0.76
DDX56-210ENST00000479440 HSPB11Q9Y547 144 aa10.29□□□□□ -0.76
DDX56-210ENST00000479440 H3BVH4 76 aa10.28□□□□□ -0.76
DDX56-210ENST00000479440 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
DDX56-210ENST00000479440 OR11H4Q8NGC9 324 aa10.28□□□□□ -0.76
DDX56-210ENST00000479440 RBM38Q9H0Z9 239 aaKnown RBP10.28□□□□□ -0.76
DDX56-210ENST00000479440 H0YIZ8 118 aa10.27□□□□□ -0.77
DDX56-210ENST00000479440 HMGB3O15347 200 aaKnown RBP10.27□□□□□ -0.77
DDX56-210ENST00000479440 SIX6O95475 246 aa10.27□□□□□ -0.77
DDX56-210ENST00000479440 ARL14EPLP0DKL9 152 aa10.27□□□□□ -0.77
DDX56-210ENST00000479440 UBE2D3P61077 147 aa10.27□□□□□ -0.77
DDX56-210ENST00000479440 UBE2D2P62837 147 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms