RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 TRAV2A0A0B4J234 112 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 C3orf85A0A1B0GTC6 90 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 TCRBV4S1A1TA0A5B7 111 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 C5orf67F2Z3F1 127 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 J3QLW9 94 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 PRB1P04280 392 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 SPINK8P0C7L1 97 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 OR2T2Q6IF00 324 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 C2orf82Q6UX34 121 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 Q6ZS92 163 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 SVBPQ8N300 66 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 DEFB119Q8N690 84 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 C5orf17Q8NAS9 161 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 SNHG12Q9BXW3 62 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 KIDINS220Q9ULH0 1771 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 MYH11P35749 1972 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 TET3O43151 1660 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 A0A0C4DFX4 3053 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 DIP2AQ14689 1571 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 UGGT1Q9NYU2 1555 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 MYO3AQ8NEV4 1616 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 TRAV10A0A0B4J240 114 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 EDF1O60869 148 aaKnown RBP1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 ERC2-IT1O76042 136 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 S100A10P60903 97 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 DEFB113Q30KQ7 82 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 C9orf153Q5TBE3 101 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 CASC2Q6XLA1 102 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 LSM10Q969L4 123 aaKnown RBP1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 AQP10Q96PS8 301 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 GOLGA3Q08378 1498 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 ARHGAP5Q13017 1502 aa1.6□□□□□ -2.15
SMNDC1-205ENST00000477763 GLI3P10071 1580 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 N4BP2Q86UW6 1770 aaPredicted RBP1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 FOCADQ5VW36 1801 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 LRP5O75197 1615 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 KIF14Q15058 1648 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 RAPGEF6Q8TEU7 1601 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 TROQ12816 1431 aaPredicted RBP1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 GOLGB1Q14789 3259 aaKnown RBP1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 CCDC88AQ3V6T2 1871 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 GBF1Q92538 1859 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 NYNRINQ9P2P1 1898 aaKnown RBP1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 IQGAP1P46940 1657 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 ZC3H13Q5T200 1668 aaKnown RBP1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 ITSN2Q9NZM3 1697 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 CUL9Q8IWT3 2517 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 PRXQ9BXM0 1461 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 LOC107984156A0A0G2JMH3 177 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 TCRBV3S1A0A5B6 114 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 NDUFB6O95139 128 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 MPC2O95563 127 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 GYPBP06028 91 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 CXCL8P10145 99 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 BRS3P32247 399 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 PDE6HQ13956 83 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 C12orf73Q69YU5 71 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 KRTAP26-1Q6PEX3 210 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 ZNF833PQ6ZTB9 187 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 SLC25A26Q70HW3 274 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 FP248Q71RG6 208 aaPredicted RBP1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 ARL17AQ8IVW1 177 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 ZNF431Q8TF32 576 aaPredicted RBP1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 SPTSSAQ969W0 71 aa1.59□□□□□ -2.15
SMNDC1-205ENST00000477763 WDR90Q96KV7 1748 aa1.59□□□□□ -2.16
SMNDC1-205ENST00000477763 PRDM15P57071 1507 aaPredicted RBP1.59□□□□□ -2.16
SMNDC1-205ENST00000477763 SAMD9LQ8IVG5 1584 aa1.59□□□□□ -2.16
SMNDC1-205ENST00000477763 TNRC18O15417 2968 aaPredicted RBP1.59□□□□□ -2.16
SMNDC1-205ENST00000477763 SBF1O95248 1867 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 CDK5RAP2Q96SN8 1893 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 NSD3Q9BZ95 1437 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 MYH7BA7E2Y1 1941 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 NCKAP5O14513 1909 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 PLEKHH2Q8IVE3 1493 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 ARHGAP35Q9NRY4 1499 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 EML6Q6ZMW3 1958 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 KDM5DQ9BY66 1539 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 TRAV14DV4A0A0A6YYC5 116 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 A0A1W2PRS3 328 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 C2orf70A6NJV1 201 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 OOSP1A8MZH6 123 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 TMEM262E9PQX1 116 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 IL5P05113 134 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 PIPP12273 146 aaPredicted RBP1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 ADCYAP1P18509 176 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 NPC2P61916 151 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 MIR22HGQ0VDD5 57 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 ELOBQ15370 118 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 OR10AG1Q8NH19 301 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 DYNLRB2Q8TF09 96 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 FAIMQ9NVQ4 179 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 TMEM242Q9NWH2 141 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 V9GYS6 101 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 DEPDC5O75140 1603 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 MYH7P12883 1935 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 ZNF142P52746 1687 aaPredicted RBP1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 QRICH2Q9H0J4 1663 aa1.58□□□□□ -2.16
SMNDC1-205ENST00000477763 POLEQ07864 2286 aa1.57□□□□□ -2.16
SMNDC1-205ENST00000477763 POLR1AO95602 1720 aaPredicted RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms