RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ZC2HC1AQ96GY0 325 aa14.85□□□□□ -0.03
COL9A3-211ENST00000477612 TRBV6-4A0A1B0GX49 114 aa14.84□□□□□ -0.03
COL9A3-211ENST00000477612 CST9LP1Q5W188 147 aa14.84□□□□□ -0.03
COL9A3-211ENST00000477612 TMUB2Q71RG4 321 aa14.84□□□□□ -0.03
COL9A3-211ENST00000477612 SFT2D1Q8WV19 159 aa14.84□□□□□ -0.03
COL9A3-211ENST00000477612 K7EP13 123 aa14.83□□□□□ -0.04
COL9A3-211ENST00000477612 PAGE4O60829 102 aa14.83□□□□□ -0.04
COL9A3-211ENST00000477612 LTAP01374 205 aa14.83□□□□□ -0.04
COL9A3-211ENST00000477612 TIRAPP58753 221 aa14.83□□□□□ -0.04
COL9A3-211ENST00000477612 UBE2G1P62253 170 aa14.83□□□□□ -0.04
COL9A3-211ENST00000477612 LGALSLQ3ZCW2 172 aaPredicted RBP14.83□□□□□ -0.04
COL9A3-211ENST00000477612 SLC25A29Q8N8R3 303 aa14.83□□□□□ -0.04
COL9A3-211ENST00000477612 FAM213BQ8TBF2 198 aa14.83□□□□□ -0.04
COL9A3-211ENST00000477612 IL36BQ9NZH7 164 aa14.83□□□□□ -0.04
COL9A3-211ENST00000477612 LRP1BQ9NZR2 4599 aa14.82□□□□□ -0.04
COL9A3-211ENST00000477612 LOC100131303A0A0U1RQF7 123 aa14.82□□□□□ -0.04
COL9A3-211ENST00000477612 LINC00315P59091 139 aa14.82□□□□□ -0.04
COL9A3-211ENST00000477612 ZNF674Q2M3X9 581 aa14.82□□□□□ -0.04
COL9A3-211ENST00000477612 Q6ZRN7 208 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-211ENST00000477612 ZNF575Q86XF7 245 aa14.82□□□□□ -0.04
COL9A3-211ENST00000477612 RYR1P21817 5038 aa14.81□□□□□ -0.04
COL9A3-211ENST00000477612 KRBOX1C9JBD0 128 aa14.81□□□□□ -0.04
COL9A3-211ENST00000477612 TPT1P13693 172 aaKnown RBP14.81□□□□□ -0.04
COL9A3-211ENST00000477612 S100A4P26447 101 aaKnown RBP14.81□□□□□ -0.04
COL9A3-211ENST00000477612 ASIPP42127 132 aa14.81□□□□□ -0.04
COL9A3-211ENST00000477612 B4DEV8 164 aa14.8□□□□□ -0.04
COL9A3-211ENST00000477612 SH2D1AO60880 128 aa14.8□□□□□ -0.04
COL9A3-211ENST00000477612 S100A9P06702 114 aaKnown RBP14.8□□□□□ -0.04
COL9A3-211ENST00000477612 H2AFB1P0C5Y9 115 aa14.8□□□□□ -0.04
COL9A3-211ENST00000477612 MGST1P10620 155 aaKnown RBP14.8□□□□□ -0.04
COL9A3-211ENST00000477612 RHOHQ15669 191 aa14.8□□□□□ -0.04
COL9A3-211ENST00000477612 FAM162BQ5T6X4 162 aa14.8□□□□□ -0.04
COL9A3-211ENST00000477612 ZFP2Q6ZN57 461 aa14.8□□□□□ -0.04
COL9A3-211ENST00000477612 A8MWV9 139 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 PFDN1O60925 122 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 DNAH10OSP0CZ25 163 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 AKR1C3P42330 323 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 WFDC10BQ8IUB3 73 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 TCTE3Q8IZS6 198 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 PRADC1Q9BSG0 188 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 LY96Q9Y6Y9 160 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 DNAH5Q8TE73 4624 aa14.79□□□□□ -0.04
COL9A3-211ENST00000477612 TRAV9-2A0A087WT02 112 aa14.78□□□□□ -0.04
COL9A3-211ENST00000477612 LINC01559Q495D7 138 aa14.78□□□□□ -0.04
COL9A3-211ENST00000477612 PARLQ9H300 379 aa14.78□□□□□ -0.04
COL9A3-211ENST00000477612 MLST8Q9BVC4 326 aa14.77□□□□□ -0.05
COL9A3-211ENST00000477612 SCRT2Q9NQ03 307 aa14.77□□□□□ -0.05
COL9A3-211ENST00000477612 IGHV3-73A0A0B4J1V6 119 aa14.76□□□□□ -0.05
COL9A3-211ENST00000477612 TRAV1-1A0A0B4J248 108 aa14.76□□□□□ -0.05
COL9A3-211ENST00000477612 ARMS2P0C7Q2 107 aa14.76□□□□□ -0.05
COL9A3-211ENST00000477612 RAB5CP51148 216 aa14.76□□□□□ -0.05
COL9A3-211ENST00000477612 UFSP1Q6NVU6 142 aa14.76□□□□□ -0.05
COL9A3-211ENST00000477612 NHLRC2Q8NBF2 726 aa14.76□□□□□ -0.05
COL9A3-211ENST00000477612 A0A1B0GV50 99 aa14.75□□□□□ -0.05
COL9A3-211ENST00000477612 H3BVH4 76 aa14.75□□□□□ -0.05
COL9A3-211ENST00000477612 M0R036 132 aa14.75□□□□□ -0.05
COL9A3-211ENST00000477612 EVI2AP22794 236 aa14.75□□□□□ -0.05
COL9A3-211ENST00000477612 DMRTA1Q5VZB9 504 aa14.75□□□□□ -0.05
COL9A3-211ENST00000477612 Q6ZNX1 250 aa14.75□□□□□ -0.05
COL9A3-211ENST00000477612 BOLA1Q9Y3E2 137 aa14.75□□□□□ -0.05
COL9A3-211ENST00000477612 SCO2A0A1W2PP80 73 aa14.74□□□□□ -0.05
COL9A3-211ENST00000477612 C16orf90A8MZG2 172 aa14.74□□□□□ -0.05
COL9A3-211ENST00000477612 EIF5AL1Q6IS14 154 aaKnown RBP14.74□□□□□ -0.05
COL9A3-211ENST00000477612 Q6ZSN1 163 aa14.74□□□□□ -0.05
COL9A3-211ENST00000477612 NFE4Q86UQ8 179 aa14.74□□□□□ -0.05
COL9A3-211ENST00000477612 GRIFINA4D1Z8 144 aa14.73□□□□□ -0.05
COL9A3-211ENST00000477612 SYT8Q8NBV8 401 aa14.73□□□□□ -0.05
COL9A3-211ENST00000477612 JPT2Q9H910 190 aa14.73□□□□□ -0.05
COL9A3-211ENST00000477612 TNFRSF18Q9Y5U5 241 aa14.73□□□□□ -0.05
COL9A3-211ENST00000477612 C1QBP02746 253 aa14.72□□□□□ -0.05
COL9A3-211ENST00000477612 LINC00694P0DN24 101 aa14.72□□□□□ -0.05
COL9A3-211ENST00000477612 SULT1A2P50226 295 aa14.72□□□□□ -0.05
COL9A3-211ENST00000477612 CCL20P78556 96 aa14.72□□□□□ -0.05
COL9A3-211ENST00000477612 SPATA12Q7Z6I5 190 aa14.72□□□□□ -0.05
COL9A3-211ENST00000477612 C10orf126Q8N4M7 172 aa14.72□□□□□ -0.05
COL9A3-211ENST00000477612 SAMD10Q9BYL1 202 aa14.72□□□□□ -0.05
COL9A3-211ENST00000477612 MANBALQ9NQG1 85 aa14.72□□□□□ -0.05
COL9A3-211ENST00000477612 IGHV3-38A0A0C4DH36 116 aa14.71□□□□□ -0.05
COL9A3-211ENST00000477612 CXCL1P09341 107 aa14.71□□□□□ -0.05
COL9A3-211ENST00000477612 BAGE2Q86Y30 109 aa14.71□□□□□ -0.05
COL9A3-211ENST00000477612 ATP6V0E2Q8NHE4 81 aa14.71□□□□□ -0.05
COL9A3-211ENST00000477612 SFRP2Q96HF1 295 aa14.71□□□□□ -0.05
COL9A3-211ENST00000477612 GTSF1LQ9H1H1 148 aa14.71□□□□□ -0.05
COL9A3-211ENST00000477612 MSRB1Q9NZV6 116 aa14.71□□□□□ -0.05
COL9A3-211ENST00000477612 RHODO00212 210 aa14.7□□□□□ -0.06
COL9A3-211ENST00000477612 LINC01556Q5JQF7 62 aa14.7□□□□□ -0.06
COL9A3-211ENST00000477612 LELP1Q5T871 98 aa14.7□□□□□ -0.06
COL9A3-211ENST00000477612 C11orf52Q96A22 123 aa14.7□□□□□ -0.06
COL9A3-211ENST00000477612 PHLDA3Q9Y5J5 127 aa14.7□□□□□ -0.06
COL9A3-211ENST00000477612 HSPG2P98160 4391 aa14.69□□□□□ -0.06
COL9A3-211ENST00000477612 TRAV8-6A0A0B4J262 113 aa14.69□□□□□ -0.06
COL9A3-211ENST00000477612 CRYGDP07320 174 aa14.69□□□□□ -0.06
COL9A3-211ENST00000477612 KRTAP10-2P60368 255 aa14.69□□□□□ -0.06
COL9A3-211ENST00000477612 SLC51BQ86UW2 128 aa14.69□□□□□ -0.06
COL9A3-211ENST00000477612 APOBP04114 4563 aaKnown RBP14.68□□□□□ -0.06
COL9A3-211ENST00000477612 TMSB15BA0A087X1C1 80 aa14.68□□□□□ -0.06
COL9A3-211ENST00000477612 TEX46H3BTG2 121 aa14.68□□□□□ -0.06
COL9A3-211ENST00000477612 CDK2AP2O75956 126 aa14.68□□□□□ -0.06
COL9A3-211ENST00000477612 ZFP82Q8N141 532 aa14.68□□□□□ -0.06
COL9A3-211ENST00000477612 GNG13Q9P2W3 67 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms