RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 RPH3ALQ9UNE2 315 aa2.54□□□□□ -2
UBR3-209ENST00000477461 PRELID1Q9Y255 219 aa2.54□□□□□ -2
UBR3-209ENST00000477461 CELSR1Q9NYQ6 3014 aa2.53□□□□□ -2
UBR3-209ENST00000477461 A0A1W2PRE2 83 aa2.53□□□□□ -2
UBR3-209ENST00000477461 IZUMO1RA6ND01 250 aa2.53□□□□□ -2
UBR3-209ENST00000477461 PGPA6NDG6 321 aa2.53□□□□□ -2
UBR3-209ENST00000477461 RBFOX3A6NFN3 312 aa2.53□□□□□ -2
UBR3-209ENST00000477461 OR11H12B2RN74 326 aa2.53□□□□□ -2
UBR3-209ENST00000477461 C11orf94C9JXX5 98 aa2.53□□□□□ -2
UBR3-209ENST00000477461 F6UZH7 168 aa2.53□□□□□ -2
UBR3-209ENST00000477461 H3BQ15 152 aa2.53□□□□□ -2
UBR3-209ENST00000477461 K7EQM0 130 aa2.53□□□□□ -2
UBR3-209ENST00000477461 SLC17A3O00476 420 aa2.53□□□□□ -2
UBR3-209ENST00000477461 MRPS12O15235 138 aaKnown RBP2.53□□□□□ -2
UBR3-209ENST00000477461 NMBP08949 121 aa2.53□□□□□ -2
UBR3-209ENST00000477461 ZNF688P0C7X2 276 aa2.53□□□□□ -2
UBR3-209ENST00000477461 IGLC2P0DOY2 106 aa2.53□□□□□ -2
UBR3-209ENST00000477461 BCL2P10415 239 aa2.53□□□□□ -2
UBR3-209ENST00000477461 IFITM2Q01629 132 aa2.53□□□□□ -2
UBR3-209ENST00000477461 PSG3Q16557 428 aa2.53□□□□□ -2
UBR3-209ENST00000477461 PSMG4Q5JS54 123 aa2.53□□□□□ -2
UBR3-209ENST00000477461 CLLU1Q5K131 121 aa2.53□□□□□ -2
UBR3-209ENST00000477461 EBLN2Q6P2I7 272 aa2.53□□□□□ -2
UBR3-209ENST00000477461 LYPD1Q8N2G4 141 aa2.53□□□□□ -2
UBR3-209ENST00000477461 C5orf17Q8NAS9 161 aa2.53□□□□□ -2
UBR3-209ENST00000477461 ZNF738Q8NE65 137 aa2.53□□□□□ -2
UBR3-209ENST00000477461 RXFP4Q8TDU9 374 aa2.53□□□□□ -2
UBR3-209ENST00000477461 LINC00052Q96N35 136 aa2.53□□□□□ -2
UBR3-209ENST00000477461 TXNDC17Q9BRA2 123 aa2.53□□□□□ -2
UBR3-209ENST00000477461 TPPP3Q9BW30 176 aa2.53□□□□□ -2
UBR3-209ENST00000477461 EIF5A2Q9GZV4 153 aaKnown RBP2.53□□□□□ -2
UBR3-209ENST00000477461 ZNF331Q9NQX6 463 aaPredicted RBP2.53□□□□□ -2
UBR3-209ENST00000477461 OTORQ9NRC9 128 aa2.53□□□□□ -2
UBR3-209ENST00000477461 ZNF586Q9NXT0 402 aa2.53□□□□□ -2
UBR3-209ENST00000477461 ARL2-SNX15V9GYD0 113 aa2.53□□□□□ -2
UBR3-209ENST00000477461 ZNF469Q96JG9 3925 aaPredicted RBP2.53□□□□□ -2
UBR3-209ENST00000477461 SERTM2A0A1B0GWG4 89 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 PDE6DO43924 150 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 AKR1C3P42330 323 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 ATP5G3P48201 142 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 CEBPGP53567 150 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 DEFB131AP59861 70 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 UBE2G1P62253 170 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 CCL20P78556 96 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 MEF2BQ02080 365 aaPredicted RBP2.52□□□□□ -2.01
UBR3-209ENST00000477461 HIST1H1AQ02539 215 aaPredicted RBP2.52□□□□□ -2.01
UBR3-209ENST00000477461 PEA15Q15121 130 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 TMEM78Q5T7P6 136 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 FOXI2Q6ZQN5 318 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 LINC01561Q8N1V8 128 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 EXOC3-AS1Q8N2X6 119 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 RNF182Q8N6D2 247 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 OR4B1Q8NGF8 309 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 OR10J6PQ8NGY7 276 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 LYPD6BQ8NI32 183 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 SUN5Q8TC36 379 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 DCANP1Q8TF63 244 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 HIST1H2BAQ96A08 127 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 RPUSD4Q96CM3 377 aaKnown RBP2.52□□□□□ -2.01
UBR3-209ENST00000477461 FAM210AQ96ND0 272 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 TCEAL7Q9BRU2 100 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 NDFIP1Q9BT67 221 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 TUBA4BQ9H853 241 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 TREM1Q9NP99 234 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 MED9Q9NWA0 146 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 VAX2Q9UIW0 290 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 YTHDF2Q9Y5A9 579 aaKnown RBP2.52□□□□□ -2.01
UBR3-209ENST00000477461 COL6A5A8TX70 2615 aa2.52□□□□□ -2.01
UBR3-209ENST00000477461 IGKV2-40A0A087WW87 121 aaPredicted RBP2.51□□□□□ -2.01
UBR3-209ENST00000477461 TRAV8-2A0A0B4J237 113 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 A0A0J9YX75 114 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 RAB19A4D1S5 217 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 RBAKDNA6NC62 111 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 KNCNA6PVL3 124 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 ZNF705FA8MVS1 300 aaPredicted RBP2.51□□□□□ -2.01
UBR3-209ENST00000477461 GGTLC3B5MD39 225 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 G3V4G9 280 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 TMEM250H0YL14 139 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 M0R3E3 92 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 PEX7O00628 323 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 IGKV2D-40P01614 121 aaPredicted RBP2.51□□□□□ -2.01
UBR3-209ENST00000477461 TCRAP04437 139 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 S100A9P06702 114 aaKnown RBP2.51□□□□□ -2.01
UBR3-209ENST00000477461 CD7P09564 240 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 HLA-DMBP28068 263 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 TSPOP30536 169 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 LEPP41159 167 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 NUTF2P61970 127 aaKnown RBP2.51□□□□□ -2.01
UBR3-209ENST00000477461 GNG5P63218 68 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 FLI1Q01543 452 aaPredicted RBP2.51□□□□□ -2.01
UBR3-209ENST00000477461 ACTL10Q5JWF8 245 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 GOLT1AQ6ZVE7 132 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 COMMD7Q86VX2 200 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 APRG1Q8IVJ8 170 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 FAM24BQ8N5W8 94 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 CYB561D1Q8N8Q1 229 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 OR8A1Q8NGG7 326 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 FMC1Q96HJ9 113 aa2.51□□□□□ -2.01
UBR3-209ENST00000477461 RARRES2Q99969 163 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms