RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TCRAP04437 139 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 HLA-DRB4P13762 266 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 NOVP48745 357 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 FOXA3P55318 350 aaPredicted RBP1.93□□□□□ -2.1
HMGN4-202ENST00000477243 CCSMST1Q4G0I0 132 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 MEIG1Q5JSS6 88 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 LINC01545Q5VT33 79 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 ZFP2Q6ZN57 461 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 SDIM1Q6ZPB5 146 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 Q6ZTC4 211 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 C7orf65Q6ZTY9 151 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 BPIFA4PQ86YQ2 179 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 RNF182Q8N6D2 247 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 SPANXA2-OT1Q8N9U9 137 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 WFDC5Q8TCV5 224 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 SMCR5Q8TEV8 140 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 UBE2WQ96B02 151 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 MRPL57Q9BQC6 102 aaKnown RBP1.93□□□□□ -2.1
HMGN4-202ENST00000477243 RPRMQ9NS64 109 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 NHP2Q9NX24 153 aaKnown RBP1.93□□□□□ -2.1
HMGN4-202ENST00000477243 TAS2R8Q9NYW2 309 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 IER3IP1Q9Y5U9 82 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 ICOSQ9Y6W8 199 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 HLA-DRB4X5D2U9 266 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 PLXNB1O43157 2135 aa1.93□□□□□ -2.1
HMGN4-202ENST00000477243 PCDH15Q96QU1 1955 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 HEATR5AQ86XA9 2040 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 UQCRHLA0A096LP55 91 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 TRBV6-6A0A0A6YYG2 114 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.92□□□□□ -2.1
HMGN4-202ENST00000477243 A0A0D9SG52 128 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 PNMA8CA0A1B0GUJ8 204 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 FAM236AA0A1B0GUQ0 79 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 FAM236BA0A1B0GV22 79 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 A0A1B0GVG6 124 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 K7EM74 188 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 RER1O15258 196 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 LHBP01229 141 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 RBP4P02753 201 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 TRGV3P03979 118 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 IGLV7-43P04211 117 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 IGKV1-16P04430 117 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 UQCRHP07919 91 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 TRGC1P0CF51 173 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 PYYP10082 97 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 COX6A1P12074 109 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 CD24P25063 80 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 XCL1P47992 114 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 EIF2B2P49770 351 aaKnown RBP1.92□□□□□ -2.1
HMGN4-202ENST00000477243 HSD52Q0P140 79 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 DIAPH2-AS1Q14236 149 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 KHDC3LQ587J8 217 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 NCMAPQ5T1S8 102 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 TMEM91Q6ZNR0 172 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 C18orf65Q6ZTR6 163 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 AAED1Q7RTV5 226 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 TEN1Q86WV5 123 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 SAXO1Q8IYX7 474 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 KCNRGQ8N5I3 272 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 PACRGLQ8N7B6 248 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 CIB3Q96Q77 187 aaPredicted RBP1.92□□□□□ -2.1
HMGN4-202ENST00000477243 SDF2Q99470 211 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 TTTY13Q9BZ97 58 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 Q9H521 79 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 NAA60Q9H7X0 242 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 SAR1AQ9NR31 198 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 V9GYS6 101 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 TANC2Q9HCD6 1990 aa1.92□□□□□ -2.1
HMGN4-202ENST00000477243 PARP14Q460N5 1801 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 SCN8AQ9UQD0 1980 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 MYO5AQ9Y4I1 1855 aaKnown RBP1.91□□□□□ -2.1
HMGN4-202ENST00000477243 IGHV3-73A0A0B4J1V6 119 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 A0A0B4J2C4 111 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 IGKV6D-41A0A0C4DH26 115 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 LOC100130705A0A1B0GUX0 176 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 TMEM235A6NFC5 223 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 K7ERJ3 54 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 PHOX2AO14813 284 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 HBDP02042 147 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 PMP2P02689 132 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 TPT1P13693 172 aaKnown RBP1.91□□□□□ -2.1
HMGN4-202ENST00000477243 COX6B1P14854 86 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 FUSP35637 526 aaKnown RBP eCLIP1.91□□□□□ -2.1
HMGN4-202ENST00000477243 TGFBR1P36897 503 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 RPS10P46783 165 aaKnown RBP1.91□□□□□ -2.1
HMGN4-202ENST00000477243 MRPS36P82909 103 aaKnown RBP1.91□□□□□ -2.1
HMGN4-202ENST00000477243 FUT5Q11128 374 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 KLRD1Q13241 179 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 DEFB116Q30KQ4 102 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 DPPA3Q6W0C5 159 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 Q6ZR03 302 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 GKN2Q86XP6 184 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 DYNAPQ8N1N2 210 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 C10orf111Q8N326 155 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 PFN4Q8NHR9 129 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 MUC7Q8TAX7 377 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 DIRC1Q969H9 104 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 LINC00574Q9H8X3 128 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 MDFICQ9P1T7 246 aa1.91□□□□□ -2.1
HMGN4-202ENST00000477243 COMMD3Q9UBI1 195 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 660.1 ms