RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 GNG4P50150 75 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 SPRNQ5BIV9 151 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 GDF5OSQ5U4N7 250 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 SPANXN1Q5VSR9 72 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 SPTSSAQ969W0 71 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 LIMD2Q9BT23 127 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 SEC11CQ9BY50 192 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 AGPAT4-IT1Q9H0P7 198 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 ALPK3Q96L96 1907 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 CR1P17927 2039 aa2.06□□□□□ -2.08
SMC5-203ENST00000475540 MYH9P35579 1960 aaKnown RBP2.05□□□□□ -2.08
SMC5-203ENST00000475540 TRBV6-7A0A0A0MS04 114 aa2.05□□□□□ -2.08
SMC5-203ENST00000475540 ATP6V1G2-DDX39BF2Z307 99 aa2.05□□□□□ -2.08
SMC5-203ENST00000475540 PRB1P04280 392 aa2.05□□□□□ -2.08
SMC5-203ENST00000475540 IL5P05113 134 aa2.05□□□□□ -2.08
SMC5-203ENST00000475540 GYPBP06028 91 aa2.05□□□□□ -2.08
SMC5-203ENST00000475540 PIPP12273 146 aaPredicted RBP2.05□□□□□ -2.08
SMC5-203ENST00000475540 IL9P15248 144 aa2.05□□□□□ -2.08
SMC5-203ENST00000475540 HIST1H1DP16402 221 aaKnown RBP2.05□□□□□ -2.08
SMC5-203ENST00000475540 TMEM242Q9NWH2 141 aa2.05□□□□□ -2.08
SMC5-203ENST00000475540 BOKQ9UMX3 212 aaPredicted RBP2.05□□□□□ -2.08
SMC5-203ENST00000475540 SERP1Q9Y6X1 66 aa2.05□□□□□ -2.08
SMC5-203ENST00000475540 IGKV2-40A0A087WW87 121 aaPredicted RBP2.04□□□□□ -2.08
SMC5-203ENST00000475540 NUPR2A6NF83 97 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 A2ML1A8K2U0 1454 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 SNAPC5O75971 98 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 IGKV2D-40P01614 121 aaPredicted RBP2.04□□□□□ -2.08
SMC5-203ENST00000475540 IGHV3-30P01768 117 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 PIRTP0C851 137 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 IGHV3-30-5P0DP03 117 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 CSAG1Q6PB30 78 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 LYPD5Q6UWN5 251 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 DMAC1Q96GE9 116 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 TRPM7Q96QT4 1865 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 WFDC10AQ9H1F0 79 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 ATG5Q9H1Y0 275 aa2.04□□□□□ -2.08
SMC5-203ENST00000475540 KMT2BQ9UMN6 2715 aaPredicted RBP2.04□□□□□ -2.08
SMC5-203ENST00000475540 TNRC6BQ9UPQ9 1833 aaKnown RBP2.04□□□□□ -2.08
SMC5-203ENST00000475540 MYOM2P54296 1465 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 IGKV3-7A0A075B6H7 116 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 TRBV10-1A0A0K0K1A3 114 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 SPAARA0A1B0GVQ0 90 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 NDUFB6O95139 128 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 IGLV3-1P01715 115 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 IGKCP01834 107 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 PDE6GP18545 87 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 TPPP2P59282 170 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 Q56UQ5 140 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 LINC00526Q96FQ7 95 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 SPANXDQ9BXN6 97 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 MRPL36Q9P0J6 103 aaKnown RBP2.03□□□□□ -2.08
SMC5-203ENST00000475540 EML5Q05BV3 1969 aa2.03□□□□□ -2.08
SMC5-203ENST00000475540 UNC13CQ8NB66 2214 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 DAPK1P53355 1430 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 MYOFQ9NZM1 2061 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 KTN1Q86UP2 1357 aaKnown RBP2.02□□□□□ -2.09
SMC5-203ENST00000475540 ATG2AQ2TAZ0 1938 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 AKAP11Q9UKA4 1901 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 TRAV23DV6A0A075B6W5 121 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 C20orf202A1L168 122 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 KLF7O75840 302 aaPredicted RBP2.02□□□□□ -2.09
SMC5-203ENST00000475540 SNCGO76070 127 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 SPATA45Q537H7 98 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 Q6AWC8 147 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 MRPL57Q9BQC6 102 aaKnown RBP2.02□□□□□ -2.09
SMC5-203ENST00000475540 NDUFA12Q9UI09 145 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 C22orf24Q9Y442 160 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 CASZ1Q86V15 1759 aa2.02□□□□□ -2.09
SMC5-203ENST00000475540 ARFGEF3Q5TH69 2177 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 INTS1Q8N201 2190 aaKnown RBP2.01□□□□□ -2.09
SMC5-203ENST00000475540 MCRIP1C9JLW8 97 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 TNFP01375 233 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 SLC25A6P12236 298 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 PPP3R1P63098 170 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 C12orf73Q69YU5 71 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 NDUFA11Q86Y39 141 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 TMEM141Q96I45 108 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 CUL7Q14999 1698 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 CC2D2AQ9P2K1 1620 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 EXPH5Q8NEV8 1989 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 MRC2Q9UBG0 1479 aa2.01□□□□□ -2.09
SMC5-203ENST00000475540 PTPRDP23468 1912 aa2□□□□□ -2.09
SMC5-203ENST00000475540 CXorf51AA0A1B0GTR3 108 aa2□□□□□ -2.09
SMC5-203ENST00000475540 SMIM6P0DI80 62 aa2□□□□□ -2.09
SMC5-203ENST00000475540 PRB4P10163 310 aaPredicted RBP2□□□□□ -2.09
SMC5-203ENST00000475540 IQCJQ1A5X6 159 aa2□□□□□ -2.09
SMC5-203ENST00000475540 SLC48A1Q6P1K1 146 aa2□□□□□ -2.09
SMC5-203ENST00000475540 C14orf144Q96I85 54 aa2□□□□□ -2.09
SMC5-203ENST00000475540 BAZ1AQ9NRL2 1556 aaPredicted RBP2□□□□□ -2.09
SMC5-203ENST00000475540 MCM3APO60318 1980 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 COL4A1P02462 1669 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 PLXNA2O75051 1894 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 PIGBOS1A0A0B4J2F0 54 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 APOC4-APOC2K7ER74 178 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 APOC2P02655 101 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 RPL7L1Q6DKI1 246 aaKnown RBP1.99□□□□□ -2.09
SMC5-203ENST00000475540 PPP3R2Q96LZ3 170 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 OBSCN-AS1Q96MR7 158 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 ODF3Q96PU9 254 aa1.99□□□□□ -2.09
SMC5-203ENST00000475540 MRPL35Q9NZE8 188 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms