RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SNRPD3P62318 126 aaKnown RBP4.28□□□□□ -1.72
HDAC8-216ENST00000470998 Q6ZSV7 163 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 Q8TAT8 98 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 MRAP2Q96G30 205 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 VGLL1Q99990 258 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 MIEN1Q9BRT3 115 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 C2orf88Q9BSF0 95 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 RHPN1-AS1Q9BWJ2 59 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 AGPAT4-IT1Q9H0P7 198 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 ST20Q9HBF5 79 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 TRAV9-2A0A087WT02 112 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 IGHV3-35A0A0C4DH35 117 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 LINC01546A6NGU7 62 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 C2orf70A6NJV1 201 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 PRSS47A8MTI9 375 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 DUSP14O95147 198 aaKnown RBP4.27□□□□□ -1.73
HDAC8-216ENST00000470998 G0S2P27469 103 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 TSPOP30536 169 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 LEPP41159 167 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 BLCAPP62952 87 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 OR8A1Q8NGG7 326 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 PRSS3P2Q8NHM4 247 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 DPF1Q92782 380 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 C14orf144Q96I85 54 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 FAM19A4Q96LR4 140 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 PRELID3AQ96N28 172 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 TPPP3Q9BW30 176 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 MAP1LC3AQ9H492 121 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 UQCR10Q9UDW1 63 aa4.27□□□□□ -1.73
HDAC8-216ENST00000470998 D6R8Y8 96 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 SYS1-DBNDD2H3BUS1 97 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 M0R143 59 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 M0R381 172 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 NXPH4O95158 308 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 HBDP02042 147 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 CKS2P33552 79 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 ASIPP42127 132 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 ZNF80P51504 273 aaPredicted RBP4.26□□□□□ -1.73
HDAC8-216ENST00000470998 KRTAP10-3P60369 221 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 TWIST1Q15672 202 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 UNQ9165/PRO28630Q6UXU0 137 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 RNF182Q8N6D2 247 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 ZFAND2AQ8N6M9 145 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 Q8N976 141 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 AP1S3Q96PC3 154 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 PMCHL2Q9BQD1 86 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 KLK15Q9H2R5 256 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 ZNF702PQ9H963 129 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 PEMTQ9UBM1 199 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 NBEAL1Q6ZS30 2694 aa4.26□□□□□ -1.73
HDAC8-216ENST00000470998 IGHV3OR16-8A0A075B7F1 116 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 TMSB15BA0A087X1C1 80 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 IGHV3-66A0A0C4DH42 116 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 TMEM213A2RRL7 107 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 OR4C46A6NHA9 309 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 KLLNB2CW77 178 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 TRBV12-3P01733 135 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 IGHV3-11P01762 117 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 HLA-DMBP28068 263 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 RPL32P62910 135 aaKnown RBP4.25□□□□□ -1.73
HDAC8-216ENST00000470998 ERCC8Q13216 396 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 FHL2Q14192 279 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 LGALS9BQ3B8N2 356 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 TDRG1Q3Y452 100 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 MRPL51Q4U2R6 128 aaKnown RBP4.25□□□□□ -1.73
HDAC8-216ENST00000470998 SPATA45Q537H7 98 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 SPANXN1Q5VSR9 72 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 LINC01545Q5VT33 79 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 LGALS9CQ6DKI2 356 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
HDAC8-216ENST00000470998 AMN1Q8IY45 258 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 FAM19A2Q8N3H0 131 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 DCANP1Q8TF63 244 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 PRO1933Q9H354 126 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 SCRT2Q9NQ03 307 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 PAM16Q9Y3D7 125 aa4.25□□□□□ -1.73
HDAC8-216ENST00000470998 IGKV3D-20A0A0C4DH25 116 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 TCAPO15273 167 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 ZNF207O43670 478 aaKnown RBP4.24□□□□□ -1.73
HDAC8-216ENST00000470998 ATP5LO75964 103 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 IGLC3P0DOY3 106 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 S100A4P26447 101 aaKnown RBP4.24□□□□□ -1.73
HDAC8-216ENST00000470998 PIK3CD-AS1Q5SR53 167 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 IGFL4Q6B9Z1 124 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 EBLN2Q6P2I7 272 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 FOXI2Q6ZQN5 318 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 Q8N1X5 172 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 OR1N2Q8NGR9 330 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 C4orf3Q8WVX3 66 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 URB1-AS1Q96HZ7 61 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 C20orf78Q9BR46 151 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 DPH3P1Q9H4G8 78 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 SIGLEC8Q9NYZ4 499 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 MRPS16Q9Y3D3 137 aaKnown RBP4.24□□□□□ -1.73
HDAC8-216ENST00000470998 MGAM2Q2M2H8 2515 aa4.24□□□□□ -1.73
HDAC8-216ENST00000470998 TRRAPQ9Y4A5 3859 aa4.23□□□□□ -1.73
HDAC8-216ENST00000470998 IGHV3OR16-13A0A075B7E8 117 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms