RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ATP5L2Q7Z4Y8 100 aa9.61□□□□□ -0.87
USP11-206ENST00000469080 ZFHX3Q15911 3703 aa9.61□□□□□ -0.87
USP11-206ENST00000469080 C10orf126Q8N4M7 172 aa9.61□□□□□ -0.87
USP11-206ENST00000469080 OR13C6PQ8NH95 151 aa9.61□□□□□ -0.87
USP11-206ENST00000469080 A8MWV9 139 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 C9JAW5 83 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 IGHV4-39P01824 125 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 IFI27P40305 119 aaPredicted RBP9.6□□□□□ -0.87
USP11-206ENST00000469080 LGALS9BQ3B8N2 356 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 IL17RELQ6ZVW7 336 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 FAM167A-AS1Q96KT0 104 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 IGHV4-30-2A0A087WSY4 118 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 TRGV3P03979 118 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 IGHV4-38-2P0DP08 117 aa9.6□□□□□ -0.87
USP11-206ENST00000469080 TEP1Q99973 2627 aaKnown RBP9.59□□□□□ -0.87
USP11-206ENST00000469080 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
USP11-206ENST00000469080 IGF2BP2-AS1Q96M15 143 aa9.59□□□□□ -0.87
USP11-206ENST00000469080 A0A1B0GXF2 115 aa9.59□□□□□ -0.87
USP11-206ENST00000469080 TEX22C9J3V5 150 aa9.59□□□□□ -0.87
USP11-206ENST00000469080 PRSS1P07477 247 aa9.59□□□□□ -0.87
USP11-206ENST00000469080 SRSF2Q01130 221 aaKnown RBP9.59□□□□□ -0.87
USP11-206ENST00000469080 ERCC8Q13216 396 aa9.59□□□□□ -0.87
USP11-206ENST00000469080 IFI27L1Q96BM0 104 aa9.59□□□□□ -0.87
USP11-206ENST00000469080 FXYD5Q96DB9 178 aa9.59□□□□□ -0.87
USP11-206ENST00000469080 HOXA3O43365 443 aaPredicted RBP9.58□□□□□ -0.88
USP11-206ENST00000469080 SCGB1C2P0DMR2 95 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 TMEM30BQ3MIR4 351 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 TMEM78Q5T7P6 136 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 C9orf153Q5TBE3 101 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 ZFP2Q6ZN57 461 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 C8orf49Q96NF6 230 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 MRPL32Q9BYC8 188 aaKnown RBP9.58□□□□□ -0.88
USP11-206ENST00000469080 GCN1Q92616 2671 aaKnown RBP9.58□□□□□ -0.88
USP11-206ENST00000469080 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
USP11-206ENST00000469080 BLCAPP62952 87 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 LINC00322Q6ZN03 302 aaPredicted RBP9.58□□□□□ -0.88
USP11-206ENST00000469080 ANKRD29Q8N6D5 301 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 LINC00311Q8N616 119 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 C15orf53Q8NAA6 179 aa9.58□□□□□ -0.88
USP11-206ENST00000469080 OOSP1A8MZH6 123 aa9.57□□□□□ -0.88
USP11-206ENST00000469080 K7EIM0 57 aa9.57□□□□□ -0.88
USP11-206ENST00000469080 NPFFO15130 113 aa9.57□□□□□ -0.88
USP11-206ENST00000469080 OR10J6PQ8NGY7 276 aa9.57□□□□□ -0.88
USP11-206ENST00000469080 SPANXA1Q9NS26 97 aa9.57□□□□□ -0.88
USP11-206ENST00000469080 KLK5Q9Y337 293 aaPredicted RBP9.57□□□□□ -0.88
USP11-206ENST00000469080 J3KT08 172 aa9.57□□□□□ -0.88
USP11-206ENST00000469080 WIPF1O43516 503 aa9.57□□□□□ -0.88
USP11-206ENST00000469080 TCRAP04437 139 aa9.57□□□□□ -0.88
USP11-206ENST00000469080 RPP21Q9H633 154 aaKnown RBP9.57□□□□□ -0.88
USP11-206ENST00000469080 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
USP11-206ENST00000469080 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
USP11-206ENST00000469080 HIGD1BQ9P298 99 aa9.56□□□□□ -0.88
USP11-206ENST00000469080 RASL10AQ92737 203 aa9.56□□□□□ -0.88
USP11-206ENST00000469080 ZC2HC1BQ5TFG8 222 aa9.55□□□□□ -0.88
USP11-206ENST00000469080 RBPMS2Q6ZRY4 209 aaKnown RBP9.55□□□□□ -0.88
USP11-206ENST00000469080 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
USP11-206ENST00000469080 TMEM160Q9NX00 188 aa9.55□□□□□ -0.88
USP11-206ENST00000469080 SMKR1H3BMG3 65 aa9.55□□□□□ -0.88
USP11-206ENST00000469080 ZNF491Q8N8L2 437 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 TRGV9Q99603 122 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 MXRA5Q9NR99 2828 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 IGHV7-81A0A0B4J1V7 117 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 C16orf92Q96LL3 132 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 LINC00574Q9H8X3 128 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 I3L2K1 104 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 Q6ZS46 218 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 PRADC1Q9BSG0 188 aa9.54□□□□□ -0.88
USP11-206ENST00000469080 COX6B1P14854 86 aa9.53□□□□□ -0.88
USP11-206ENST00000469080 TWIST1Q15672 202 aa9.53□□□□□ -0.88
USP11-206ENST00000469080 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
USP11-206ENST00000469080 LINC01587Q99440 93 aa9.53□□□□□ -0.88
USP11-206ENST00000469080 HBDP02042 147 aa9.53□□□□□ -0.88
USP11-206ENST00000469080 HERVK_113P63121 156 aa9.53□□□□□ -0.88
USP11-206ENST00000469080 TRBV12-3P01733 135 aa9.52□□□□□ -0.88
USP11-206ENST00000469080 DUX3Q96PT4 197 aa9.52□□□□□ -0.88
USP11-206ENST00000469080 HAX1O00165 279 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 ARMS2P0C7Q2 107 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 FANCD2OSQ96PS1 177 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 BEX4Q9NWD9 120 aaPredicted RBP9.52□□□□□ -0.89
USP11-206ENST00000469080 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 LMO4P61968 165 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 MRGPRG-AS1Q2M3A8 158 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 C10orf99Q6UWK7 81 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 MAPKAPK5-AS1Q8N8E1 139 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 KLK15Q9H2R5 256 aa9.52□□□□□ -0.89
USP11-206ENST00000469080 A0A1W2PRX2 142 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 TMEM213A2RRL7 107 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 F6UB75 175 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 M0R1W7 72 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 S100A4P26447 101 aaKnown RBP9.51□□□□□ -0.89
USP11-206ENST00000469080 FBXL19-AS1Q494R0 122 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 C11orf71Q6IPW1 123 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 HRCT1Q6UXD1 115 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 Q8N9W7 124 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 TRAV2A0A0B4J234 112 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 CFHR4Q92496 578 aa9.51□□□□□ -0.89
USP11-206ENST00000469080 BBC3Q96PG8 261 aaPredicted RBP9.51□□□□□ -0.89
USP11-206ENST00000469080 FOXC2Q99958 501 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms