RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 LY96Q9Y6Y9 160 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 PCNTO95613 3336 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 CENPFP49454 3210 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 IGKV1D-42A0A075B6H8 117 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 IGKV2D-24A0A075B6R9 120 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 LOC107986453A0A1B0GWG9 222 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 ZNF737O75373 536 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 PYYP10082 97 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 MGST1P10620 155 aaKnown RBP2.66□□□□□ -1.98
SCFD1-205ENST00000469043 SLC25A4P12235 298 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 PCBD1P61457 104 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 BLCAPP62952 87 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 SS18Q15532 418 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 TEX261Q6UWH6 196 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 IGFL3Q6UXB1 125 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 HMGN2P46Q86SG4 172 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 ATOH7Q8N100 152 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 CLEC2BQ92478 149 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 SLC35B3Q9H1N7 401 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 ZFP30Q9Y2G7 519 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 LSM2Q9Y333 95 aaKnown RBP2.66□□□□□ -1.98
SCFD1-205ENST00000469043 SHROOM3Q8TF72 1996 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 PDE4DIPQ5VU43 2346 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 CEP290O15078 2479 aa2.66□□□□□ -1.98
SCFD1-205ENST00000469043 HEATR1Q9H583 2144 aaKnown RBP2.66□□□□□ -1.98
SCFD1-205ENST00000469043 TSC2P49815 1807 aa2.65□□□□□ -1.98
SCFD1-205ENST00000469043 PATJQ8NI35 1801 aa2.65□□□□□ -1.98
SCFD1-205ENST00000469043 EML5Q05BV3 1969 aa2.65□□□□□ -1.98
SCFD1-205ENST00000469043 MED12LQ86YW9 2145 aa2.65□□□□□ -1.98
SCFD1-205ENST00000469043 IGLV4-60A0A075B6I1 120 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 C17orf112F2Z3M2 114 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 CD3DP04234 171 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 SAA1P0DJI8 122 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-205ENST00000469043 PEBP1P30086 187 aaKnown RBP2.65□□□□□ -1.99
SCFD1-205ENST00000469043 ZNF90Q03938 601 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 KCNRGQ8N5I3 272 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 CCL4L1Q8NHW4 92 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 DPH3Q96FX2 82 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 RERGLQ9H628 205 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 MPC1Q9Y5U8 109 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 MPDZO75970 2070 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 LTBP2Q14767 1821 aa2.65□□□□□ -1.99
SCFD1-205ENST00000469043 TRBV20-1A0A075B6N2 111 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 TRAV1-1A0A0B4J248 108 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 HMSDA8MTL9 139 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 CCDC179H3BU77 68 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 IGLV1-51P01701 117 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 PMP2P02689 132 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 RBP4P02753 201 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 CD14P08571 375 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 CCL4P13236 92 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 GNG2P59768 71 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 TMEM258P61165 79 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 CIRBPQ14011 172 aaKnown RBP2.64□□□□□ -1.99
SCFD1-205ENST00000469043 SNX29P2Q8IUI4 249 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 C8orf59Q8N0T1 100 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-205ENST00000469043 C10orf111Q8N326 155 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 Q8N814 137 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 HYLS1Q96M11 299 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 SNRNP25Q9BV90 132 aaKnown RBP2.64□□□□□ -1.99
SCFD1-205ENST00000469043 METTL1Q9UBP6 276 aaKnown RBP2.64□□□□□ -1.99
SCFD1-205ENST00000469043 PLXNA4Q9HCM2 1894 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 DNAH12Q6ZR08 3092 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 MYO7AQ13402 2215 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 HTTP42858 3142 aa2.64□□□□□ -1.99
SCFD1-205ENST00000469043 CEP350Q5VT06 3117 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 IGKV2D-26A0A0A0MRZ7 120 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 hDV103S1A0JD37 113 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 IFITM5A6NNB3 132 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 B4DSR2 109 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 M0R233 179 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 TRACP01848 142 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 HRES1P13985 223 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 HINT1P49773 126 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-205ENST00000469043 ROMO1P60602 79 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 BTG2P78543 158 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 ZNF345Q14585 488 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 PYDC2Q56P42 97 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 SPANXN5Q5MJ07 72 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 ZNF826PQ6ZT77 177 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 GTF2H5Q6ZYL4 71 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 OR5AS1Q8N127 324 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 ACBD7Q8N6N7 88 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 OR2T35Q8NGX2 323 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 NABP2Q9BQ15 211 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 CXCL16Q9H2A7 254 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 C14orf132Q9NPU4 83 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 SAR1AQ9NR31 198 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 RPL26L1Q9UNX3 145 aaKnown RBP2.63□□□□□ -1.99
SCFD1-205ENST00000469043 SHANK1Q9Y566 2161 aa2.63□□□□□ -1.99
SCFD1-205ENST00000469043 BRCA2P51587 3418 aa2.62□□□□□ -1.99
SCFD1-205ENST00000469043 TRAV12-2A0A075B6T6 113 aa2.62□□□□□ -1.99
SCFD1-205ENST00000469043 PNMA8CA0A1B0GUJ8 204 aa2.62□□□□□ -1.99
SCFD1-205ENST00000469043 TMEM218A2RU14 115 aa2.62□□□□□ -1.99
SCFD1-205ENST00000469043 ODF3BA8MYP8 253 aa2.62□□□□□ -1.99
SCFD1-205ENST00000469043 FNDC10F2Z333 226 aa2.62□□□□□ -1.99
SCFD1-205ENST00000469043 G3V3Q6 166 aa2.62□□□□□ -1.99
SCFD1-205ENST00000469043 CCL25O15444 150 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms