RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 COX6B1P14854 86 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 C12orf54Q6X4T0 127 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 NMUP48645 174 aa14.02□□□□□ -0.16
TSPAN4-210ENST00000464987 BOD1L2Q8IYS8 172 aa14.02□□□□□ -0.16
TSPAN4-210ENST00000464987 OR1N2Q8NGR9 330 aa14.02□□□□□ -0.16
TSPAN4-210ENST00000464987 RPL39LQ96EH5 51 aaKnown RBP14.02□□□□□ -0.16
TSPAN4-210ENST00000464987 FOXC2Q99958 501 aa14.02□□□□□ -0.16
TSPAN4-210ENST00000464987 VPS25Q9BRG1 176 aa14.02□□□□□ -0.16
TSPAN4-210ENST00000464987 ZNF580Q9UK33 172 aa14.02□□□□□ -0.16
TSPAN4-210ENST00000464987 LAGE3Q14657 143 aa14.02□□□□□ -0.17
TSPAN4-210ENST00000464987 RASL10AQ92737 203 aa14.02□□□□□ -0.17
TSPAN4-210ENST00000464987 DEFB125Q8N687 156 aa14.01□□□□□ -0.17
TSPAN4-210ENST00000464987 DUX5Q96PT3 197 aa14.01□□□□□ -0.17
TSPAN4-210ENST00000464987 HHLA3Q9XRX5 114 aa14.01□□□□□ -0.17
TSPAN4-210ENST00000464987 IGKV2D-26A0A0A0MRZ7 120 aa14□□□□□ -0.17
TSPAN4-210ENST00000464987 ZNF688P0C7X2 276 aa14□□□□□ -0.17
TSPAN4-210ENST00000464987 TTTY13Q9BZ97 58 aa14□□□□□ -0.17
TSPAN4-210ENST00000464987 ZMAT4Q9H898 229 aa14□□□□□ -0.17
TSPAN4-210ENST00000464987 KLLNB2CW77 178 aa14□□□□□ -0.17
TSPAN4-210ENST00000464987 MRAP2Q96G30 205 aa14□□□□□ -0.17
TSPAN4-210ENST00000464987 C7orf71A4D174 169 aa13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 TMEM238C9JI98 176 aa13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 MGPP08493 103 aa13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 SMIM2Q9BVW6 85 aa13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 DPH3P1Q9H4G8 78 aa13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 AKAP9Q99996 3911 aa13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 IGHV4-31P0DP07 118 aa13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 OCIAD2Q56VL3 154 aa13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 BEX4Q9NWD9 120 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-210ENST00000464987 J3QLI3 93 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 IGKV3-20P01619 116 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 SYNJ2BPP57105 145 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 PSMG4Q5JS54 123 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 CST9LQ9H4G1 147 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 VPREB3Q9UKI3 123 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 IGHV4OR15-8A0A075B7B6 117 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 A0A087WW49 117 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 TRAV12-3A0A0B4J271 114 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 ID1P41134 155 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 JPT2Q9H910 190 aa13.98□□□□□ -0.17
TSPAN4-210ENST00000464987 TRBV7-9A0A0J9YWB2 115 aa13.97□□□□□ -0.17
TSPAN4-210ENST00000464987 SUMO2P61956 95 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-210ENST00000464987 TMEM97Q5BJF2 176 aa13.97□□□□□ -0.17
TSPAN4-210ENST00000464987 ZNF702PQ9H963 129 aa13.97□□□□□ -0.17
TSPAN4-210ENST00000464987 CUBNO60494 3623 aa13.97□□□□□ -0.17
TSPAN4-210ENST00000464987 NAV2Q8IVL1 2488 aa13.97□□□□□ -0.17
TSPAN4-210ENST00000464987 HOXA3O43365 443 aaPredicted RBP13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 FSHBP01225 129 aa13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 IGKCP01834 107 aa13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 PLA2G2AP14555 144 aa13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 Q6YL49 198 aa13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 MRPL35Q9NZE8 188 aaKnown RBP13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 TRAV12-2A0A075B6T6 113 aa13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 GTSCR1Q86UQ5 136 aa13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 MYOZ3Q8TDC0 251 aa13.96□□□□□ -0.17
TSPAN4-210ENST00000464987 MED14OSP0DP75 135 aa13.95□□□□□ -0.18
TSPAN4-210ENST00000464987 TMEM160Q9NX00 188 aa13.95□□□□□ -0.18
TSPAN4-210ENST00000464987 PRRC2AP48634 2157 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-210ENST00000464987 J3QKU1 62 aa13.95□□□□□ -0.18
TSPAN4-210ENST00000464987 FAM159AQ6UWV7 190 aa13.95□□□□□ -0.18
TSPAN4-210ENST00000464987 ADAMTSL5Q6ZMM2 481 aa13.95□□□□□ -0.18
TSPAN4-210ENST00000464987 C18orf65Q6ZTR6 163 aa13.95□□□□□ -0.18
TSPAN4-210ENST00000464987 DEFB104AQ8WTQ1 72 aa13.95□□□□□ -0.18
TSPAN4-210ENST00000464987 ATP5LO75964 103 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 VAMP3Q15836 100 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 ZC2HC1BQ5TFG8 222 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 CD7P09564 240 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 LINC00315P59091 139 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 NEGR1Q7Z3B1 354 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 AP1S3Q96PC3 154 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 KIF25-AS1Q9Y6Z4 181 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 TLN2Q9Y4G6 2542 aa13.94□□□□□ -0.18
TSPAN4-210ENST00000464987 CREBBPQ92793 2442 aa13.93□□□□□ -0.18
TSPAN4-210ENST00000464987 TMEM89A2RUT3 159 aa13.93□□□□□ -0.18
TSPAN4-210ENST00000464987 DPM2O94777 84 aa13.93□□□□□ -0.18
TSPAN4-210ENST00000464987 LGALS1P09382 135 aaKnown RBP13.93□□□□□ -0.18
TSPAN4-210ENST00000464987 TMEM238LA0A1B0GVL6 79 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 K7EQG2 157 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 HOXD3P31249 432 aaPredicted RBP13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 DEFB136Q30KP8 78 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 APCP25054 2843 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 A0A0J9YX75 114 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 NXPH4O95158 308 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 Q5PR19 223 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 HIST2H2BDQ6DRA6 164 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 OR9G4Q8NGQ1 327 aa13.92□□□□□ -0.18
TSPAN4-210ENST00000464987 A0A087WWL8 130 aa13.91□□□□□ -0.18
TSPAN4-210ENST00000464987 C20orf78Q9BR46 151 aa13.91□□□□□ -0.18
TSPAN4-210ENST00000464987 A0A087WX48 190 aa13.91□□□□□ -0.18
TSPAN4-210ENST00000464987 TRAV8-6A0A0B4J262 113 aa13.91□□□□□ -0.18
TSPAN4-210ENST00000464987 SIVA1O15304 175 aa13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 SPINK13Q1W4C9 94 aa13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 DEFB113Q30KQ7 82 aa13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 AMMECR1LQ6DCA0 310 aa13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 MDFICQ9P1T7 246 aa13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 ELANEP08246 267 aa13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 SNRPD3P62318 126 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 TOMM6Q96B49 74 aa13.9□□□□□ -0.18
TSPAN4-210ENST00000464987 K7ERU9 68 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms